Protein–RNA interactions for Protein: P27449

ATP6V0C, V-type proton ATPase 16 kDa proteolipid subunit, humanhuman

Predictions only

Length 155 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0CP27449 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATP6V0CP27449 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ATP6V0CP27449 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
ATP6V0CP27449 AC124067.4-201ENST00000519691 2379 ntBASIC15.12■□□□□ 0.01
ATP6V0CP27449 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATP6V0CP27449 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC15.12■□□□□ 0.01
ATP6V0CP27449 TFP1-202ENST00000475455 1573 ntBASIC15.12■□□□□ 0.01
ATP6V0CP27449 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC15.12■□□□□ 0.01
ATP6V0CP27449 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
ATP6V0CP27449 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATP6V0CP27449 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATP6V0CP27449 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATP6V0CP27449 COX20-201ENST00000366528 568 ntTSL 2 BASIC15.12■□□□□ 0.01
ATP6V0CP27449 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATP6V0CP27449 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATP6V0CP27449 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC15.12■□□□□ 0.01
ATP6V0CP27449 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC15.12■□□□□ 0.01
ATP6V0CP27449 AC100791.3-201ENST00000617619 330 ntBASIC15.12■□□□□ 0.01
ATP6V0CP27449 AL136967.2-201ENST00000623968 743 ntBASIC15.12■□□□□ 0.01
ATP6V0CP27449 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATP6V0CP27449 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
ATP6V0CP27449 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
ATP6V0CP27449 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATP6V0CP27449 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATP6V0CP27449 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATP6V0CP27449 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATP6V0CP27449 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATP6V0CP27449 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATP6V0CP27449 GCK-205ENST00000437084 1385 ntTSL 5 BASIC15.11■□□□□ 0.01
ATP6V0CP27449 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ATP6V0CP27449 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC15.11■□□□□ 0.01
ATP6V0CP27449 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
ATP6V0CP27449 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC15.11■□□□□ 0.01
ATP6V0CP27449 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
ATP6V0CP27449 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC15.11■□□□□ 0.01
ATP6V0CP27449 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
ATP6V0CP27449 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ATP6V0CP27449 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ATP6V0CP27449 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC15.11■□□□□ 0.01
ATP6V0CP27449 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC15.11■□□□□ 0.01
ATP6V0CP27449 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ATP6V0CP27449 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ATP6V0CP27449 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC15.11■□□□□ 0.01
ATP6V0CP27449 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ATP6V0CP27449 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
ATP6V0CP27449 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ATP6V0CP27449 AC027612.3-201ENST00000413684 1047 ntBASIC15.11■□□□□ 0.01
ATP6V0CP27449 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC15.11■□□□□ 0.01
ATP6V0CP27449 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC15.11■□□□□ 0.01
ATP6V0CP27449 AL162412.1-201ENST00000567129 965 ntBASIC15.11■□□□□ 0.01
ATP6V0CP27449 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
ATP6V0CP27449 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ATP6V0CP27449 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ATP6V0CP27449 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ATP6V0CP27449 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ATP6V0CP27449 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ATP6V0CP27449 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC15.11■□□□□ 0.01
ATP6V0CP27449 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ATP6V0CP27449 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
ATP6V0CP27449 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ATP6V0CP27449 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ATP6V0CP27449 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
ATP6V0CP27449 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC15.1■□□□□ 0.01
ATP6V0CP27449 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ATP6V0CP27449 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
ATP6V0CP27449 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ATP6V0CP27449 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ATP6V0CP27449 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC15.1■□□□□ 0.01
ATP6V0CP27449 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ATP6V0CP27449 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC15.1■□□□□ 0.01
ATP6V0CP27449 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ATP6V0CP27449 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC15.1■□□□□ 0.01
ATP6V0CP27449 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
ATP6V0CP27449 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ATP6V0CP27449 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ATP6V0CP27449 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
ATP6V0CP27449 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC15.1■□□□□ 0.01
ATP6V0CP27449 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
ATP6V0CP27449 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
ATP6V0CP27449 KRT18P68-201ENST00000392293 1000 ntBASIC15.1■□□□□ 0.01
ATP6V0CP27449 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ATP6V0CP27449 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ATP6V0CP27449 AC096631.2-201ENST00000436136 790 ntBASIC15.1■□□□□ 0.01
ATP6V0CP27449 UBE2DNL-204ENST00000602536 740 ntBASIC15.1■□□□□ 0.01
ATP6V0CP27449 TFG-210ENST00000620299 1289 ntTSL 5 BASIC15.1■□□□□ 0.01
ATP6V0CP27449 TNRC18P3-201ENST00000441896 2691 ntBASIC15.1■□□□□ 0.01
ATP6V0CP27449 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ATP6V0CP27449 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC15.1■□□□□ 0.01
ATP6V0CP27449 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC15.1■□□□□ 0.01
ATP6V0CP27449 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
ATP6V0CP27449 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ATP6V0CP27449 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ATP6V0CP27449 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ATP6V0CP27449 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ATP6V0CP27449 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ATP6V0CP27449 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ATP6V0CP27449 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ATP6V0CP27449 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ATP6V0CP27449 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ATP6V0CP27449 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms