Protein–RNA interactions for Protein: P18505

GABRB1, Gamma-aminobutyric acid receptor subunit beta-1, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB1P18505 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GABRB1P18505 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GABRB1P18505 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.05■□□□□ 0.32
GABRB1P18505 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
GABRB1P18505 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.05■□□□□ 0.32
GABRB1P18505 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
GABRB1P18505 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.04■□□□□ 0.32
GABRB1P18505 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
GABRB1P18505 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
GABRB1P18505 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
GABRB1P18505 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.04■□□□□ 0.32
GABRB1P18505 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.04■□□□□ 0.32
GABRB1P18505 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
GABRB1P18505 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.04■□□□□ 0.32
GABRB1P18505 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
GABRB1P18505 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GABRB1P18505 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
GABRB1P18505 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC17.04■□□□□ 0.32
GABRB1P18505 PLD4-205ENST00000553861 667 ntTSL 2 BASIC17.04■□□□□ 0.32
GABRB1P18505 AC133552.2-202ENST00000575694 574 ntBASIC17.04■□□□□ 0.32
GABRB1P18505 RAP2CP1-201ENST00000605103 478 ntBASIC17.04■□□□□ 0.32
GABRB1P18505 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
GABRB1P18505 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GABRB1P18505 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.04■□□□□ 0.32
GABRB1P18505 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.04■□□□□ 0.32
GABRB1P18505 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.04■□□□□ 0.32
GABRB1P18505 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.04■□□□□ 0.32
GABRB1P18505 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
GABRB1P18505 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
GABRB1P18505 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GABRB1P18505 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
GABRB1P18505 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.04■□□□□ 0.32
GABRB1P18505 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.04■□□□□ 0.32
GABRB1P18505 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
GABRB1P18505 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
GABRB1P18505 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
GABRB1P18505 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GABRB1P18505 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
GABRB1P18505 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GABRB1P18505 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
GABRB1P18505 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GABRB1P18505 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
GABRB1P18505 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
GABRB1P18505 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
GABRB1P18505 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
GABRB1P18505 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
GABRB1P18505 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
GABRB1P18505 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GABRB1P18505 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.03■□□□□ 0.32
GABRB1P18505 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
GABRB1P18505 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
GABRB1P18505 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
GABRB1P18505 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.03■□□□□ 0.32
GABRB1P18505 GUK1-205ENST00000366722 850 ntTSL 3 BASIC17.03■□□□□ 0.32
GABRB1P18505 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC17.03■□□□□ 0.32
GABRB1P18505 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
GABRB1P18505 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC17.03■□□□□ 0.32
GABRB1P18505 NME6-213ENST00000451657 871 ntTSL 2 BASIC17.03■□□□□ 0.32
GABRB1P18505 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC17.03■□□□□ 0.32
GABRB1P18505 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17.03■□□□□ 0.32
GABRB1P18505 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC17.03■□□□□ 0.32
GABRB1P18505 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
GABRB1P18505 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.03■□□□□ 0.32
GABRB1P18505 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.03■□□□□ 0.32
GABRB1P18505 PRORSD1P-202ENST00000563365 2154 ntBASIC17.03■□□□□ 0.32
GABRB1P18505 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
GABRB1P18505 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
GABRB1P18505 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
GABRB1P18505 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.03■□□□□ 0.32
GABRB1P18505 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GABRB1P18505 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GABRB1P18505 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
GABRB1P18505 AC093677.2-201ENST00000600169 1863 ntBASIC17.03■□□□□ 0.32
GABRB1P18505 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GABRB1P18505 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GABRB1P18505 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
GABRB1P18505 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.32
GABRB1P18505 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
GABRB1P18505 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
GABRB1P18505 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
GABRB1P18505 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
GABRB1P18505 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
GABRB1P18505 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
GABRB1P18505 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
GABRB1P18505 GXYLT1P2-201ENST00000433312 1230 ntBASIC17.02■□□□□ 0.32
GABRB1P18505 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
GABRB1P18505 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC17.02■□□□□ 0.32
GABRB1P18505 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC17.02■□□□□ 0.32
GABRB1P18505 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC17.02■□□□□ 0.32
GABRB1P18505 AC087623.3-201ENST00000607047 1098 ntBASIC17.02■□□□□ 0.32
GABRB1P18505 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
GABRB1P18505 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
GABRB1P18505 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
GABRB1P18505 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
GABRB1P18505 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.02■□□□□ 0.31
GABRB1P18505 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
GABRB1P18505 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
GABRB1P18505 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
GABRB1P18505 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.02■□□□□ 0.31
GABRB1P18505 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms