Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
ERCC2P18074 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ERCC2P18074 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ERCC2P18074 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.45■□□□□ 0.7
ERCC2P18074 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ERCC2P18074 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
ERCC2P18074 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ERCC2P18074 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ERCC2P18074 MIR1238-201ENST00000408483 83 ntBASIC19.45■□□□□ 0.7
ERCC2P18074 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC19.45■□□□□ 0.7
ERCC2P18074 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.45■□□□□ 0.7
ERCC2P18074 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.45■□□□□ 0.7
ERCC2P18074 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
ERCC2P18074 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.45■□□□□ 0.7
ERCC2P18074 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ERCC2P18074 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ERCC2P18074 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.45■□□□□ 0.7
ERCC2P18074 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
ERCC2P18074 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ERCC2P18074 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
ERCC2P18074 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ERCC2P18074 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.45■□□□□ 0.7
ERCC2P18074 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
ERCC2P18074 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.44■□□□□ 0.7
ERCC2P18074 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
ERCC2P18074 AL512353.2-201ENST00000448759 1962 ntBASIC19.44■□□□□ 0.7
ERCC2P18074 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.44■□□□□ 0.7
ERCC2P18074 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC19.44■□□□□ 0.7
ERCC2P18074 TBC1D3P2-202ENST00000577902 1649 ntBASIC19.44■□□□□ 0.7
ERCC2P18074 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ERCC2P18074 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ERCC2P18074 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
ERCC2P18074 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ERCC2P18074 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
ERCC2P18074 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ERCC2P18074 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ERCC2P18074 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ERCC2P18074 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC19.44■□□□□ 0.7
ERCC2P18074 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC19.44■□□□□ 0.7
ERCC2P18074 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
ERCC2P18074 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
ERCC2P18074 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.44■□□□□ 0.7
ERCC2P18074 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ERCC2P18074 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ERCC2P18074 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.44■□□□□ 0.7
ERCC2P18074 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ERCC2P18074 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ERCC2P18074 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.44■□□□□ 0.7
ERCC2P18074 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
ERCC2P18074 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ERCC2P18074 KRT8P32-201ENST00000512863 1461 ntBASIC19.43■□□□□ 0.7
ERCC2P18074 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ERCC2P18074 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ERCC2P18074 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ERCC2P18074 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ERCC2P18074 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ERCC2P18074 CA15P1-201ENST00000481698 905 ntBASIC19.43■□□□□ 0.7
ERCC2P18074 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC19.43■□□□□ 0.7
ERCC2P18074 AC008622.2-201ENST00000617006 1229 ntBASIC19.43■□□□□ 0.7
ERCC2P18074 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.43■□□□□ 0.7
ERCC2P18074 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.43■□□□□ 0.7
ERCC2P18074 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
ERCC2P18074 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
ERCC2P18074 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ERCC2P18074 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ERCC2P18074 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ERCC2P18074 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
ERCC2P18074 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
ERCC2P18074 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
ERCC2P18074 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ERCC2P18074 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ERCC2P18074 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ERCC2P18074 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ERCC2P18074 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
ERCC2P18074 AC093525.10-201ENST00000625130 1569 ntBASIC19.42■□□□□ 0.7
ERCC2P18074 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ERCC2P18074 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ERCC2P18074 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ERCC2P18074 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ERCC2P18074 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.42■□□□□ 0.7
ERCC2P18074 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ERCC2P18074 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ERCC2P18074 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
ERCC2P18074 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ERCC2P18074 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.42■□□□□ 0.7
ERCC2P18074 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ERCC2P18074 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
ERCC2P18074 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ERCC2P18074 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC19.41■□□□□ 0.7
ERCC2P18074 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.41■□□□□ 0.7
ERCC2P18074 HEIH-201ENST00000623091 1652 ntBASIC19.41■□□□□ 0.7
ERCC2P18074 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
ERCC2P18074 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ERCC2P18074 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC19.41■□□□□ 0.7
ERCC2P18074 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ERCC2P18074 AC068587.9-201ENST00000641814 219 ntBASIC19.41■□□□□ 0.7
ERCC2P18074 AL031598.1-201ENST00000561511 1773 ntBASIC19.41■□□□□ 0.7
ERCC2P18074 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.41■□□□□ 0.7
ERCC2P18074 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC19.41■□□□□ 0.7
ERCC2P18074 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms