Protein–RNA interactions for Protein: P10827

THRA, Thyroid hormone receptor alpha, humanhuman

Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THRAP10827 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
THRAP10827 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.95■□□□□ 0.62
THRAP10827 UNC93B2-201ENST00000285383 730 ntBASIC18.95■□□□□ 0.62
THRAP10827 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC18.95■□□□□ 0.62
THRAP10827 C1QL1P1-201ENST00000568105 661 ntBASIC18.95■□□□□ 0.62
THRAP10827 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC18.95■□□□□ 0.62
THRAP10827 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
THRAP10827 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.95■□□□□ 0.62
THRAP10827 AL049812.1-201ENST00000432563 2267 ntBASIC18.95■□□□□ 0.62
THRAP10827 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.95■□□□□ 0.62
THRAP10827 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
THRAP10827 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
THRAP10827 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.95■□□□□ 0.62
THRAP10827 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
THRAP10827 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
THRAP10827 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
THRAP10827 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
THRAP10827 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.94■□□□□ 0.62
THRAP10827 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
THRAP10827 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
THRAP10827 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
THRAP10827 TFP1-202ENST00000475455 1573 ntBASIC18.94■□□□□ 0.62
THRAP10827 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
THRAP10827 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
THRAP10827 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
THRAP10827 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
THRAP10827 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.94■□□□□ 0.62
THRAP10827 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
THRAP10827 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
THRAP10827 RCN1P1-201ENST00000400413 996 ntBASIC18.94■□□□□ 0.62
THRAP10827 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
THRAP10827 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.94■□□□□ 0.62
THRAP10827 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC18.94■□□□□ 0.62
THRAP10827 AC116562.2-201ENST00000507042 360 ntBASIC18.94■□□□□ 0.62
THRAP10827 AP000525.1-201ENST00000608286 694 ntBASIC18.94■□□□□ 0.62
THRAP10827 AC010331.1-201ENST00000611423 582 ntBASIC18.94■□□□□ 0.62
THRAP10827 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
THRAP10827 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
THRAP10827 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
THRAP10827 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
THRAP10827 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
THRAP10827 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
THRAP10827 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
THRAP10827 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
THRAP10827 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
THRAP10827 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.93■□□□□ 0.62
THRAP10827 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
THRAP10827 HCG11-201ENST00000411553 5696 ntBASIC18.93■□□□□ 0.62
THRAP10827 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
THRAP10827 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
THRAP10827 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
THRAP10827 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
THRAP10827 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18.93■□□□□ 0.62
THRAP10827 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.93■□□□□ 0.62
THRAP10827 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC18.93■□□□□ 0.62
THRAP10827 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC18.93■□□□□ 0.62
THRAP10827 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.93■□□□□ 0.62
THRAP10827 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.93■□□□□ 0.62
THRAP10827 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC18.93■□□□□ 0.62
THRAP10827 GLDC-219ENST00000640208 420 ntTSL 2 BASIC18.93■□□□□ 0.62
THRAP10827 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
THRAP10827 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.93■□□□□ 0.62
THRAP10827 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
THRAP10827 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
THRAP10827 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.93■□□□□ 0.62
THRAP10827 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
THRAP10827 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.93■□□□□ 0.62
THRAP10827 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
THRAP10827 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
THRAP10827 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
THRAP10827 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
THRAP10827 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
THRAP10827 AC018553.1-201ENST00000616682 1458 ntBASIC18.92■□□□□ 0.62
THRAP10827 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
THRAP10827 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
THRAP10827 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
THRAP10827 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
THRAP10827 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
THRAP10827 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
THRAP10827 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC18.92■□□□□ 0.62
THRAP10827 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC18.92■□□□□ 0.62
THRAP10827 YBX1P10-201ENST00000444752 975 ntBASIC18.92■□□□□ 0.62
THRAP10827 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC18.92■□□□□ 0.62
THRAP10827 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC18.92■□□□□ 0.62
THRAP10827 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC18.92■□□□□ 0.62
THRAP10827 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
THRAP10827 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
THRAP10827 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
THRAP10827 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
THRAP10827 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.92■□□□□ 0.62
THRAP10827 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
THRAP10827 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.92■□□□□ 0.62
THRAP10827 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
THRAP10827 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
THRAP10827 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
THRAP10827 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
THRAP10827 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.91■□□□□ 0.62
THRAP10827 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
THRAP10827 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
THRAP10827 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms