Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
FREM3P0C091 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
FREM3P0C091 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
FREM3P0C091 ILF2-202ENST00000368681 726 ntTSL 2 BASIC17.15■□□□□ 0.34
FREM3P0C091 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
FREM3P0C091 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC17.15■□□□□ 0.34
FREM3P0C091 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC17.15■□□□□ 0.34
FREM3P0C091 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.15■□□□□ 0.34
FREM3P0C091 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
FREM3P0C091 AC116562.4-202ENST00000641738 218 ntBASIC17.15■□□□□ 0.34
FREM3P0C091 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
FREM3P0C091 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC17.15■□□□□ 0.34
FREM3P0C091 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
FREM3P0C091 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
FREM3P0C091 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
FREM3P0C091 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
FREM3P0C091 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.15■□□□□ 0.34
FREM3P0C091 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
FREM3P0C091 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
FREM3P0C091 FP475955.4-201ENST00000623131 1990 ntBASIC17.15■□□□□ 0.34
FREM3P0C091 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
FREM3P0C091 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
FREM3P0C091 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
FREM3P0C091 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
FREM3P0C091 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.15■□□□□ 0.34
FREM3P0C091 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
FREM3P0C091 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
FREM3P0C091 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
FREM3P0C091 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
FREM3P0C091 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
FREM3P0C091 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
FREM3P0C091 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC17.15■□□□□ 0.34
FREM3P0C091 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC17.15■□□□□ 0.34
FREM3P0C091 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
FREM3P0C091 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
FREM3P0C091 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
FREM3P0C091 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
FREM3P0C091 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
FREM3P0C091 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC17.15■□□□□ 0.34
FREM3P0C091 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.34
FREM3P0C091 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
FREM3P0C091 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
FREM3P0C091 CD70-202ENST00000423145 881 ntTSL 2 BASIC17.14■□□□□ 0.33
FREM3P0C091 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.14■□□□□ 0.33
FREM3P0C091 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.14■□□□□ 0.33
FREM3P0C091 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC17.14■□□□□ 0.33
FREM3P0C091 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
FREM3P0C091 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
FREM3P0C091 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
FREM3P0C091 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC17.14■□□□□ 0.33
FREM3P0C091 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17.14■□□□□ 0.33
FREM3P0C091 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
FREM3P0C091 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
FREM3P0C091 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.14■□□□□ 0.33
FREM3P0C091 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.14■□□□□ 0.33
FREM3P0C091 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
FREM3P0C091 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
FREM3P0C091 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
FREM3P0C091 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
FREM3P0C091 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17.14■□□□□ 0.33
FREM3P0C091 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC17.14■□□□□ 0.33
FREM3P0C091 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
FREM3P0C091 AL138966.2-201ENST00000621997 464 ntBASIC17.14■□□□□ 0.33
FREM3P0C091 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.14■□□□□ 0.33
FREM3P0C091 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC17.13■□□□□ 0.33
FREM3P0C091 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
FREM3P0C091 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
FREM3P0C091 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
FREM3P0C091 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.13■□□□□ 0.33
FREM3P0C091 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
FREM3P0C091 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
FREM3P0C091 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
FREM3P0C091 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
FREM3P0C091 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC17.13■□□□□ 0.33
FREM3P0C091 TSPY21P-201ENST00000433481 731 ntBASIC17.13■□□□□ 0.33
FREM3P0C091 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC17.13■□□□□ 0.33
FREM3P0C091 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC17.13■□□□□ 0.33
FREM3P0C091 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC17.13■□□□□ 0.33
FREM3P0C091 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
FREM3P0C091 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.13■□□□□ 0.33
FREM3P0C091 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
FREM3P0C091 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
FREM3P0C091 AL023973.1-201ENST00000624619 620 ntBASIC17.13■□□□□ 0.33
FREM3P0C091 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC17.13■□□□□ 0.33
FREM3P0C091 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
FREM3P0C091 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
FREM3P0C091 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
FREM3P0C091 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
FREM3P0C091 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.13■□□□□ 0.33
FREM3P0C091 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
FREM3P0C091 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
FREM3P0C091 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.12■□□□□ 0.33
FREM3P0C091 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
FREM3P0C091 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC17.12■□□□□ 0.33
FREM3P0C091 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
FREM3P0C091 ATP5G1P1-201ENST00000448724 379 ntBASIC17.12■□□□□ 0.33
FREM3P0C091 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
FREM3P0C091 AC063952.2-201ENST00000498792 1227 ntBASIC17.12■□□□□ 0.33
FREM3P0C091 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
FREM3P0C091 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms