Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
MT-ND1P03886 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.45
MT-ND1P03886 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
MT-ND1P03886 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC17.83■□□□□ 0.44
MT-ND1P03886 MFF-205ENST00000354503 1085 ntTSL 2 BASIC17.83■□□□□ 0.44
MT-ND1P03886 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC17.83■□□□□ 0.44
MT-ND1P03886 AC006970.2-201ENST00000450065 779 ntBASIC17.83■□□□□ 0.44
MT-ND1P03886 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC17.83■□□□□ 0.44
MT-ND1P03886 HES2-206ENST00000489730 730 ntTSL 2 BASIC17.83■□□□□ 0.44
MT-ND1P03886 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC17.83■□□□□ 0.44
MT-ND1P03886 AC005829.2-201ENST00000571422 1056 ntBASIC17.83■□□□□ 0.44
MT-ND1P03886 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC17.83■□□□□ 0.44
MT-ND1P03886 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
MT-ND1P03886 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
MT-ND1P03886 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
MT-ND1P03886 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
MT-ND1P03886 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
MT-ND1P03886 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC17.83■□□□□ 0.44
MT-ND1P03886 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
MT-ND1P03886 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
MT-ND1P03886 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
MT-ND1P03886 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
MT-ND1P03886 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
MT-ND1P03886 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
MT-ND1P03886 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
MT-ND1P03886 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
MT-ND1P03886 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
MT-ND1P03886 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
MT-ND1P03886 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
MT-ND1P03886 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
MT-ND1P03886 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC17.82■□□□□ 0.44
MT-ND1P03886 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC17.82■□□□□ 0.44
MT-ND1P03886 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC17.82■□□□□ 0.44
MT-ND1P03886 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
MT-ND1P03886 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.82■□□□□ 0.44
MT-ND1P03886 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.82■□□□□ 0.44
MT-ND1P03886 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC17.82■□□□□ 0.44
MT-ND1P03886 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
MT-ND1P03886 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
MT-ND1P03886 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
MT-ND1P03886 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
MT-ND1P03886 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
MT-ND1P03886 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
MT-ND1P03886 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
MT-ND1P03886 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
MT-ND1P03886 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
MT-ND1P03886 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
MT-ND1P03886 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.82■□□□□ 0.44
MT-ND1P03886 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
MT-ND1P03886 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
MT-ND1P03886 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC17.81■□□□□ 0.44
MT-ND1P03886 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
MT-ND1P03886 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
MT-ND1P03886 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.81■□□□□ 0.44
MT-ND1P03886 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.81■□□□□ 0.44
MT-ND1P03886 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.81■□□□□ 0.44
MT-ND1P03886 FEM1AP3-201ENST00000403722 1741 ntBASIC17.81■□□□□ 0.44
MT-ND1P03886 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
MT-ND1P03886 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
MT-ND1P03886 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.81■□□□□ 0.44
MT-ND1P03886 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
MT-ND1P03886 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
MT-ND1P03886 GOLGA6L3-201ENST00000507199 1679 ntBASIC17.81■□□□□ 0.44
MT-ND1P03886 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.81■□□□□ 0.44
MT-ND1P03886 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
MT-ND1P03886 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
MT-ND1P03886 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
MT-ND1P03886 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
MT-ND1P03886 DUSP5P2-201ENST00000426873 1033 ntBASIC17.81■□□□□ 0.44
MT-ND1P03886 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.81■□□□□ 0.44
MT-ND1P03886 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC17.81■□□□□ 0.44
MT-ND1P03886 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
MT-ND1P03886 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC17.81■□□□□ 0.44
MT-ND1P03886 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC17.81■□□□□ 0.44
MT-ND1P03886 AC092118.2-201ENST00000613495 667 ntBASIC17.81■□□□□ 0.44
MT-ND1P03886 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
MT-ND1P03886 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
MT-ND1P03886 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
MT-ND1P03886 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
MT-ND1P03886 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
MT-ND1P03886 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
MT-ND1P03886 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
MT-ND1P03886 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
MT-ND1P03886 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.81■□□□□ 0.44
MT-ND1P03886 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.8■□□□□ 0.44
MT-ND1P03886 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
MT-ND1P03886 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
MT-ND1P03886 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
MT-ND1P03886 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
MT-ND1P03886 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC17.8■□□□□ 0.44
MT-ND1P03886 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
MT-ND1P03886 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
MT-ND1P03886 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.8■□□□□ 0.44
MT-ND1P03886 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
MT-ND1P03886 GGT1-206ENST00000404223 952 ntTSL 2 BASIC17.8■□□□□ 0.44
MT-ND1P03886 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
MT-ND1P03886 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
MT-ND1P03886 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC17.8■□□□□ 0.44
MT-ND1P03886 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC17.8■□□□□ 0.44
MT-ND1P03886 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms