Protein–RNA interactions for Protein: O94993

SOX30, Transcription factor SOX-30, humanhuman

Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX30O94993 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
SOX30O94993 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SOX30O94993 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SOX30O94993 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
SOX30O94993 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
SOX30O94993 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SOX30O94993 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SOX30O94993 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SOX30O94993 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SOX30O94993 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
SOX30O94993 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
SOX30O94993 FAM207BP-201ENST00000447172 505 ntBASIC17.6■□□□□ 0.41
SOX30O94993 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
SOX30O94993 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC17.6■□□□□ 0.41
SOX30O94993 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.6■□□□□ 0.41
SOX30O94993 CKBP1-201ENST00000565489 1086 ntBASIC17.6■□□□□ 0.41
SOX30O94993 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.6■□□□□ 0.41
SOX30O94993 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SOX30O94993 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.6■□□□□ 0.41
SOX30O94993 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.6■□□□□ 0.41
SOX30O94993 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC17.6■□□□□ 0.41
SOX30O94993 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SOX30O94993 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
SOX30O94993 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SOX30O94993 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.6■□□□□ 0.41
SOX30O94993 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SOX30O94993 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SOX30O94993 AL138781.2-201ENST00000617896 1843 ntBASIC17.6■□□□□ 0.41
SOX30O94993 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SOX30O94993 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SOX30O94993 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SOX30O94993 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SOX30O94993 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SOX30O94993 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SOX30O94993 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SOX30O94993 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SOX30O94993 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.59■□□□□ 0.41
SOX30O94993 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SOX30O94993 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SOX30O94993 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.59■□□□□ 0.41
SOX30O94993 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.59■□□□□ 0.41
SOX30O94993 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SOX30O94993 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.59■□□□□ 0.41
SOX30O94993 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SOX30O94993 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SOX30O94993 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SOX30O94993 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SOX30O94993 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.59■□□□□ 0.41
SOX30O94993 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC17.59■□□□□ 0.41
SOX30O94993 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SOX30O94993 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC17.59■□□□□ 0.41
SOX30O94993 RPS2P55-201ENST00000397318 883 ntBASIC17.59■□□□□ 0.41
SOX30O94993 AC107956.1-201ENST00000494359 873 ntBASIC17.59■□□□□ 0.41
SOX30O94993 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SOX30O94993 AC116562.2-201ENST00000507042 360 ntBASIC17.59■□□□□ 0.41
SOX30O94993 TK2-204ENST00000525974 1178 ntTSL 2 BASIC17.59■□□□□ 0.41
SOX30O94993 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC17.59■□□□□ 0.41
SOX30O94993 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC17.59■□□□□ 0.41
SOX30O94993 CD177P1-201ENST00000606252 935 ntBASIC17.59■□□□□ 0.41
SOX30O94993 AP000692.2-201ENST00000608391 879 ntBASIC17.59■□□□□ 0.41
SOX30O94993 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SOX30O94993 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
SOX30O94993 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SOX30O94993 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SOX30O94993 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.59■□□□□ 0.41
SOX30O94993 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.59■□□□□ 0.41
SOX30O94993 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.59■□□□□ 0.41
SOX30O94993 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SOX30O94993 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SOX30O94993 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
SOX30O94993 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
SOX30O94993 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.58■□□□□ 0.41
SOX30O94993 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.58■□□□□ 0.41
SOX30O94993 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC17.58■□□□□ 0.41
SOX30O94993 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.58■□□□□ 0.41
SOX30O94993 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
SOX30O94993 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SOX30O94993 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.58■□□□□ 0.41
SOX30O94993 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
SOX30O94993 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
SOX30O94993 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SOX30O94993 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
SOX30O94993 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SOX30O94993 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SOX30O94993 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.58■□□□□ 0.4
SOX30O94993 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SOX30O94993 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SOX30O94993 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SOX30O94993 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SOX30O94993 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC17.58■□□□□ 0.4
SOX30O94993 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SOX30O94993 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC17.58■□□□□ 0.4
SOX30O94993 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.58■□□□□ 0.4
SOX30O94993 AC233702.5-201ENST00000584107 538 ntBASIC17.58■□□□□ 0.4
SOX30O94993 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC17.58■□□□□ 0.4
SOX30O94993 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
SOX30O94993 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SOX30O94993 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
SOX30O94993 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SOX30O94993 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms