Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
OPHN1O60890 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
OPHN1O60890 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC19.7■□□□□ 0.74
OPHN1O60890 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
OPHN1O60890 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC19.7■□□□□ 0.74
OPHN1O60890 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.7■□□□□ 0.74
OPHN1O60890 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
OPHN1O60890 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.7■□□□□ 0.74
OPHN1O60890 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
OPHN1O60890 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
OPHN1O60890 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
OPHN1O60890 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
OPHN1O60890 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
OPHN1O60890 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
OPHN1O60890 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.7■□□□□ 0.74
OPHN1O60890 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
OPHN1O60890 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
OPHN1O60890 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
OPHN1O60890 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC19.7■□□□□ 0.74
OPHN1O60890 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.7■□□□□ 0.74
OPHN1O60890 AL161938.1-201ENST00000569833 2180 ntBASIC19.7■□□□□ 0.74
OPHN1O60890 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
OPHN1O60890 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
OPHN1O60890 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
OPHN1O60890 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
OPHN1O60890 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.69■□□□□ 0.74
OPHN1O60890 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
OPHN1O60890 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
OPHN1O60890 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
OPHN1O60890 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
OPHN1O60890 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
OPHN1O60890 AC020763.4-201ENST00000623414 4170 ntBASIC19.69■□□□□ 0.74
OPHN1O60890 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
OPHN1O60890 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
OPHN1O60890 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
OPHN1O60890 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC19.69■□□□□ 0.74
OPHN1O60890 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
OPHN1O60890 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
OPHN1O60890 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.69■□□□□ 0.74
OPHN1O60890 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
OPHN1O60890 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
OPHN1O60890 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
OPHN1O60890 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.69■□□□□ 0.74
OPHN1O60890 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
OPHN1O60890 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
OPHN1O60890 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
OPHN1O60890 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.69■□□□□ 0.74
OPHN1O60890 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
OPHN1O60890 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC19.69■□□□□ 0.74
OPHN1O60890 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
OPHN1O60890 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
OPHN1O60890 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.69■□□□□ 0.74
OPHN1O60890 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
OPHN1O60890 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC19.69■□□□□ 0.74
OPHN1O60890 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
OPHN1O60890 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.68■□□□□ 0.74
OPHN1O60890 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
OPHN1O60890 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
OPHN1O60890 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
OPHN1O60890 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
OPHN1O60890 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.68■□□□□ 0.74
OPHN1O60890 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
OPHN1O60890 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
OPHN1O60890 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
OPHN1O60890 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC19.68■□□□□ 0.74
OPHN1O60890 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.68■□□□□ 0.74
OPHN1O60890 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19.68■□□□□ 0.74
OPHN1O60890 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
OPHN1O60890 DUT-205ENST00000558813 769 ntTSL 2 BASIC19.68■□□□□ 0.74
OPHN1O60890 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.68■□□□□ 0.74
OPHN1O60890 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
OPHN1O60890 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
OPHN1O60890 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
OPHN1O60890 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
OPHN1O60890 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC19.68■□□□□ 0.74
OPHN1O60890 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
OPHN1O60890 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
OPHN1O60890 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.68■□□□□ 0.74
OPHN1O60890 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
OPHN1O60890 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
OPHN1O60890 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
OPHN1O60890 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
OPHN1O60890 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
OPHN1O60890 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
OPHN1O60890 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.67■□□□□ 0.74
OPHN1O60890 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
OPHN1O60890 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
OPHN1O60890 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
OPHN1O60890 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
OPHN1O60890 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.67■□□□□ 0.74
OPHN1O60890 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
OPHN1O60890 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
OPHN1O60890 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
OPHN1O60890 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
OPHN1O60890 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.67■□□□□ 0.74
OPHN1O60890 TERF1P1-201ENST00000311003 1181 ntBASIC19.67■□□□□ 0.74
OPHN1O60890 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
OPHN1O60890 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
OPHN1O60890 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.67■□□□□ 0.74
OPHN1O60890 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms