Protein–RNA interactions for Protein: O60563

CCNT1, Cyclin-T1, humanhuman

Known RBP Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1O60563 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC21.46■■□□□ 1.03
CCNT1O60563 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC21.46■■□□□ 1.03
CCNT1O60563 AC008622.2-201ENST00000617006 1229 ntBASIC21.46■■□□□ 1.03
CCNT1O60563 AC073912.3-201ENST00000624414 853 ntBASIC21.46■■□□□ 1.03
CCNT1O60563 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCNT1O60563 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCNT1O60563 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCNT1O60563 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC21.46■■□□□ 1.03
CCNT1O60563 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CCNT1O60563 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
CCNT1O60563 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC21.45■■□□□ 1.02
CCNT1O60563 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC21.45■■□□□ 1.02
CCNT1O60563 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CCNT1O60563 AL512353.2-201ENST00000448759 1962 ntBASIC21.45■■□□□ 1.02
CCNT1O60563 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC21.45■■□□□ 1.02
CCNT1O60563 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
CCNT1O60563 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
CCNT1O60563 TSPY14P-201ENST00000303979 915 ntBASIC21.45■■□□□ 1.02
CCNT1O60563 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CCNT1O60563 BUB3-202ENST00000368859 667 ntTSL 3 BASIC21.45■■□□□ 1.02
CCNT1O60563 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CCNT1O60563 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC21.45■■□□□ 1.02
CCNT1O60563 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CCNT1O60563 AL023803.3-201ENST00000615559 522 ntBASIC21.45■■□□□ 1.02
CCNT1O60563 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CCNT1O60563 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC21.45■■□□□ 1.02
CCNT1O60563 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CCNT1O60563 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
CCNT1O60563 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC21.45■■□□□ 1.02
CCNT1O60563 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
CCNT1O60563 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CCNT1O60563 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CCNT1O60563 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCNT1O60563 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCNT1O60563 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC21.44■■□□□ 1.02
CCNT1O60563 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCNT1O60563 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CCNT1O60563 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCNT1O60563 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCNT1O60563 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCNT1O60563 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CCNT1O60563 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCNT1O60563 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC21.44■■□□□ 1.02
CCNT1O60563 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCNT1O60563 CCR12P-201ENST00000446203 998 ntBASIC21.44■■□□□ 1.02
CCNT1O60563 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CCNT1O60563 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CCNT1O60563 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCNT1O60563 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCNT1O60563 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCNT1O60563 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CCNT1O60563 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCNT1O60563 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCNT1O60563 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC21.44■■□□□ 1.02
CCNT1O60563 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCNT1O60563 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CCNT1O60563 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC21.44■■□□□ 1.02
CCNT1O60563 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCNT1O60563 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
CCNT1O60563 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CCNT1O60563 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC21.43■■□□□ 1.02
CCNT1O60563 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC21.43■■□□□ 1.02
CCNT1O60563 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC21.43■■□□□ 1.02
CCNT1O60563 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CCNT1O60563 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
CCNT1O60563 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CCNT1O60563 INGX-201ENST00000359239 846 ntBASIC21.43■■□□□ 1.02
CCNT1O60563 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC21.43■■□□□ 1.02
CCNT1O60563 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC21.43■■□□□ 1.02
CCNT1O60563 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CCNT1O60563 RPS20-210ENST00000523936 899 ntTSL 2 BASIC21.43■■□□□ 1.02
CCNT1O60563 EGLN1P1-201ENST00000531623 762 ntBASIC21.43■■□□□ 1.02
CCNT1O60563 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC21.43■■□□□ 1.02
CCNT1O60563 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC21.43■■□□□ 1.02
CCNT1O60563 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC21.43■■□□□ 1.02
CCNT1O60563 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC21.43■■□□□ 1.02
CCNT1O60563 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC21.43■■□□□ 1.02
CCNT1O60563 AC116562.4-202ENST00000641738 218 ntBASIC21.43■■□□□ 1.02
CCNT1O60563 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CCNT1O60563 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
CCNT1O60563 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CCNT1O60563 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CCNT1O60563 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
CCNT1O60563 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CCNT1O60563 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
CCNT1O60563 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
CCNT1O60563 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC21.43■■□□□ 1.02
CCNT1O60563 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CCNT1O60563 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
CCNT1O60563 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CCNT1O60563 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CCNT1O60563 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CCNT1O60563 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC21.42■■□□□ 1.02
CCNT1O60563 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
CCNT1O60563 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
CCNT1O60563 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC21.42■■□□□ 1.02
CCNT1O60563 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
CCNT1O60563 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CCNT1O60563 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CCNT1O60563 TSPY17P-201ENST00000450329 467 ntBASIC21.42■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms