Protein–RNA interactions for Protein: O60506

SYNCRIP, Heterogeneous nuclear ribonucleoprotein Q, humanhuman

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIPO60506 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC19.3■□□□□ 0.68
SYNCRIPO60506 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SYNCRIPO60506 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SYNCRIPO60506 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC19.3■□□□□ 0.68
SYNCRIPO60506 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC19.3■□□□□ 0.68
SYNCRIPO60506 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC19.3■□□□□ 0.68
SYNCRIPO60506 AL023973.1-201ENST00000624619 620 ntBASIC19.3■□□□□ 0.68
SYNCRIPO60506 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
SYNCRIPO60506 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SYNCRIPO60506 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
SYNCRIPO60506 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC19.3■□□□□ 0.68
SYNCRIPO60506 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SYNCRIPO60506 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
SYNCRIPO60506 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SYNCRIPO60506 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SYNCRIPO60506 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.3■□□□□ 0.68
SYNCRIPO60506 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SYNCRIPO60506 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SYNCRIPO60506 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SYNCRIPO60506 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SYNCRIPO60506 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
SYNCRIPO60506 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SYNCRIPO60506 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SYNCRIPO60506 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.29■□□□□ 0.68
SYNCRIPO60506 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SYNCRIPO60506 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
SYNCRIPO60506 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
SYNCRIPO60506 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SYNCRIPO60506 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.29■□□□□ 0.68
SYNCRIPO60506 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SYNCRIPO60506 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SYNCRIPO60506 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SYNCRIPO60506 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC19.29■□□□□ 0.68
SYNCRIPO60506 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC19.29■□□□□ 0.68
SYNCRIPO60506 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
SYNCRIPO60506 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SYNCRIPO60506 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.29■□□□□ 0.68
SYNCRIPO60506 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
SYNCRIPO60506 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SYNCRIPO60506 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SYNCRIPO60506 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SYNCRIPO60506 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
SYNCRIPO60506 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
SYNCRIPO60506 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.28■□□□□ 0.68
SYNCRIPO60506 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
SYNCRIPO60506 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
SYNCRIPO60506 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SYNCRIPO60506 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC19.28■□□□□ 0.68
SYNCRIPO60506 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SYNCRIPO60506 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SYNCRIPO60506 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SYNCRIPO60506 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SYNCRIPO60506 BUB3-202ENST00000368859 667 ntTSL 3 BASIC19.28■□□□□ 0.68
SYNCRIPO60506 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC19.28■□□□□ 0.68
SYNCRIPO60506 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC19.28■□□□□ 0.68
SYNCRIPO60506 CLN6-204ENST00000564752 900 ntTSL 3 BASIC19.28■□□□□ 0.68
SYNCRIPO60506 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC19.28■□□□□ 0.68
SYNCRIPO60506 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
SYNCRIPO60506 AL358472.4-201ENST00000633140 710 ntBASIC19.28■□□□□ 0.68
SYNCRIPO60506 MYC-208ENST00000641036 567 ntBASIC19.28■□□□□ 0.68
SYNCRIPO60506 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
SYNCRIPO60506 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SYNCRIPO60506 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SYNCRIPO60506 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SYNCRIPO60506 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SYNCRIPO60506 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SYNCRIPO60506 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
SYNCRIPO60506 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SYNCRIPO60506 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SYNCRIPO60506 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SYNCRIPO60506 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SYNCRIPO60506 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SYNCRIPO60506 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SYNCRIPO60506 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SYNCRIPO60506 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SYNCRIPO60506 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
SYNCRIPO60506 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.27■□□□□ 0.68
SYNCRIPO60506 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.27■□□□□ 0.68
SYNCRIPO60506 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC19.27■□□□□ 0.68
SYNCRIPO60506 Telomerase-vert.1-201ENST00000363312 438 ntBASIC19.27■□□□□ 0.68
SYNCRIPO60506 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SYNCRIPO60506 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
SYNCRIPO60506 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC19.27■□□□□ 0.68
SYNCRIPO60506 AL031133.1-201ENST00000406807 723 ntBASIC19.27■□□□□ 0.68
SYNCRIPO60506 TSPY21P-201ENST00000433481 731 ntBASIC19.27■□□□□ 0.68
SYNCRIPO60506 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC19.27■□□□□ 0.68
SYNCRIPO60506 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC19.27■□□□□ 0.68
SYNCRIPO60506 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
SYNCRIPO60506 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SYNCRIPO60506 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SYNCRIPO60506 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
SYNCRIPO60506 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SYNCRIPO60506 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC19.27■□□□□ 0.68
SYNCRIPO60506 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
SYNCRIPO60506 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC19.27■□□□□ 0.67
SYNCRIPO60506 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SYNCRIPO60506 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.27■□□□□ 0.67
SYNCRIPO60506 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.27■□□□□ 0.67
SYNCRIPO60506 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
SYNCRIPO60506 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms