Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHGA12O60330 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHGA12O60330 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHGA12O60330 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHGA12O60330 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC18.73■□□□□ 0.59
PCDHGA12O60330 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHGA12O60330 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC18.73■□□□□ 0.59
PCDHGA12O60330 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHGA12O60330 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.73■□□□□ 0.59
PCDHGA12O60330 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC18.73■□□□□ 0.59
PCDHGA12O60330 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC18.73■□□□□ 0.59
PCDHGA12O60330 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHGA12O60330 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC18.73■□□□□ 0.59
PCDHGA12O60330 PP7080-204ENST00000510714 601 ntTSL 3 BASIC18.73■□□□□ 0.59
PCDHGA12O60330 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHGA12O60330 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
PCDHGA12O60330 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC18.73■□□□□ 0.59
PCDHGA12O60330 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC18.73■□□□□ 0.59
PCDHGA12O60330 AC083849.1-201ENST00000615227 514 ntBASIC18.73■□□□□ 0.59
PCDHGA12O60330 HYMAI.1-201ENST00000620949 238 ntBASIC18.73■□□□□ 0.59
PCDHGA12O60330 DFFB-212ENST00000625756 649 ntTSL 5 BASIC18.73■□□□□ 0.59
PCDHGA12O60330 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHGA12O60330 AC125437.2-201ENST00000625180 2167 ntBASIC18.73■□□□□ 0.59
PCDHGA12O60330 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.73■□□□□ 0.59
PCDHGA12O60330 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHGA12O60330 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.73■□□□□ 0.59
PCDHGA12O60330 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
PCDHGA12O60330 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHGA12O60330 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.73■□□□□ 0.59
PCDHGA12O60330 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHGA12O60330 BX323043.1-201ENST00000641006 1765 ntBASIC18.73■□□□□ 0.59
PCDHGA12O60330 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
PCDHGA12O60330 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHGA12O60330 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHGA12O60330 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHGA12O60330 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHGA12O60330 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.72■□□□□ 0.59
PCDHGA12O60330 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
PCDHGA12O60330 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHGA12O60330 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHGA12O60330 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.72■□□□□ 0.59
PCDHGA12O60330 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.72■□□□□ 0.59
PCDHGA12O60330 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHGA12O60330 AC026396.1-201ENST00000419388 421 ntBASIC18.72■□□□□ 0.59
PCDHGA12O60330 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC18.72■□□□□ 0.59
PCDHGA12O60330 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC18.72■□□□□ 0.59
PCDHGA12O60330 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHGA12O60330 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHGA12O60330 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHGA12O60330 KRT8P11-201ENST00000409686 1436 ntBASIC18.72■□□□□ 0.59
PCDHGA12O60330 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHGA12O60330 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHGA12O60330 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.72■□□□□ 0.59
PCDHGA12O60330 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.72■□□□□ 0.59
PCDHGA12O60330 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHGA12O60330 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHGA12O60330 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.71■□□□□ 0.59
PCDHGA12O60330 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.71■□□□□ 0.59
PCDHGA12O60330 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHGA12O60330 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHGA12O60330 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.71■□□□□ 0.59
PCDHGA12O60330 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHGA12O60330 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHGA12O60330 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHGA12O60330 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHGA12O60330 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC18.71■□□□□ 0.59
PCDHGA12O60330 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC18.71■□□□□ 0.59
PCDHGA12O60330 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.71■□□□□ 0.59
PCDHGA12O60330 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC18.71■□□□□ 0.59
PCDHGA12O60330 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHGA12O60330 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
PCDHGA12O60330 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHGA12O60330 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHGA12O60330 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHGA12O60330 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC18.71■□□□□ 0.59
PCDHGA12O60330 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.71■□□□□ 0.59
PCDHGA12O60330 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.71■□□□□ 0.58
PCDHGA12O60330 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
PCDHGA12O60330 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHGA12O60330 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
PCDHGA12O60330 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHGA12O60330 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
PCDHGA12O60330 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.7■□□□□ 0.58
PCDHGA12O60330 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.7■□□□□ 0.58
PCDHGA12O60330 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHGA12O60330 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHGA12O60330 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
PCDHGA12O60330 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.7■□□□□ 0.58
PCDHGA12O60330 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
PCDHGA12O60330 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC18.7■□□□□ 0.58
PCDHGA12O60330 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.7■□□□□ 0.58
PCDHGA12O60330 GCSHP2-201ENST00000560971 527 ntBASIC18.7■□□□□ 0.58
PCDHGA12O60330 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC18.7■□□□□ 0.58
PCDHGA12O60330 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.7■□□□□ 0.58
PCDHGA12O60330 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC18.7■□□□□ 0.58
PCDHGA12O60330 AL691432.3-201ENST00000621860 400 ntBASIC18.7■□□□□ 0.58
PCDHGA12O60330 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.7■□□□□ 0.58
PCDHGA12O60330 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHGA12O60330 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
PCDHGA12O60330 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms