Protein–RNA interactions for Protein: O43909

EXTL3, Exostosin-like 3, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3O43909 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
EXTL3O43909 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
EXTL3O43909 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC20.51■□□□□ 0.87
EXTL3O43909 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
EXTL3O43909 MIR4674-201ENST00000582457 87 ntBASIC20.51■□□□□ 0.87
EXTL3O43909 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
EXTL3O43909 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
EXTL3O43909 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC20.51■□□□□ 0.87
EXTL3O43909 GPAT2P1-201ENST00000444924 1672 ntBASIC20.51■□□□□ 0.87
EXTL3O43909 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
EXTL3O43909 KRT18P22-201ENST00000402024 1347 ntBASIC20.51■□□□□ 0.87
EXTL3O43909 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
EXTL3O43909 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
EXTL3O43909 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
EXTL3O43909 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
EXTL3O43909 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
EXTL3O43909 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
EXTL3O43909 RCC2P3-201ENST00000418112 1537 ntBASIC20.5■□□□□ 0.87
EXTL3O43909 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC20.5■□□□□ 0.87
EXTL3O43909 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC20.5■□□□□ 0.87
EXTL3O43909 AL023284.2-201ENST00000405850 579 ntBASIC20.5■□□□□ 0.87
EXTL3O43909 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC20.5■□□□□ 0.87
EXTL3O43909 ECEL1P2-202ENST00000465689 757 ntBASIC20.5■□□□□ 0.87
EXTL3O43909 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
EXTL3O43909 FAM87A-204ENST00000613235 858 ntBASIC20.5■□□□□ 0.87
EXTL3O43909 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
EXTL3O43909 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC20.5■□□□□ 0.87
EXTL3O43909 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
EXTL3O43909 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
EXTL3O43909 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
EXTL3O43909 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
EXTL3O43909 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
EXTL3O43909 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
EXTL3O43909 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
EXTL3O43909 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
EXTL3O43909 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
EXTL3O43909 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
EXTL3O43909 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
EXTL3O43909 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC20.49■□□□□ 0.87
EXTL3O43909 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC20.49■□□□□ 0.87
EXTL3O43909 TMA16-209ENST00000513272 803 ntTSL 2 BASIC20.49■□□□□ 0.87
EXTL3O43909 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC20.49■□□□□ 0.87
EXTL3O43909 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC20.49■□□□□ 0.87
EXTL3O43909 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
EXTL3O43909 AC068587.9-201ENST00000641814 219 ntBASIC20.49■□□□□ 0.87
EXTL3O43909 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC20.49■□□□□ 0.87
EXTL3O43909 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
EXTL3O43909 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
EXTL3O43909 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
EXTL3O43909 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
EXTL3O43909 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
EXTL3O43909 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC20.48■□□□□ 0.87
EXTL3O43909 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
EXTL3O43909 GXYLT1P6-201ENST00000456472 1187 ntBASIC20.48■□□□□ 0.87
EXTL3O43909 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
EXTL3O43909 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
EXTL3O43909 CLN6-221ENST00000637494 765 ntTSL 5 BASIC20.48■□□□□ 0.87
EXTL3O43909 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC20.48■□□□□ 0.87
EXTL3O43909 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
EXTL3O43909 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC20.48■□□□□ 0.87
EXTL3O43909 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC20.48■□□□□ 0.87
EXTL3O43909 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
EXTL3O43909 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC20.48■□□□□ 0.87
EXTL3O43909 HEIH-201ENST00000623091 1652 ntBASIC20.48■□□□□ 0.87
EXTL3O43909 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
EXTL3O43909 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.48■□□□□ 0.87
EXTL3O43909 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
EXTL3O43909 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC20.47■□□□□ 0.87
EXTL3O43909 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC20.47■□□□□ 0.87
EXTL3O43909 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
EXTL3O43909 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC20.47■□□□□ 0.87
EXTL3O43909 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
EXTL3O43909 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC20.47■□□□□ 0.87
EXTL3O43909 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
EXTL3O43909 MCCD1P1-208ENST00000445732 328 ntBASIC20.47■□□□□ 0.87
EXTL3O43909 DUT-205ENST00000558813 769 ntTSL 2 BASIC20.47■□□□□ 0.87
EXTL3O43909 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC20.47■□□□□ 0.87
EXTL3O43909 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
EXTL3O43909 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
EXTL3O43909 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC20.47■□□□□ 0.87
EXTL3O43909 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
EXTL3O43909 AL109659.2-201ENST00000606809 1674 ntBASIC20.47■□□□□ 0.87
EXTL3O43909 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC20.47■□□□□ 0.87
EXTL3O43909 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
EXTL3O43909 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
EXTL3O43909 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
EXTL3O43909 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
EXTL3O43909 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
EXTL3O43909 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
EXTL3O43909 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
EXTL3O43909 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC20.46■□□□□ 0.87
EXTL3O43909 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
EXTL3O43909 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
EXTL3O43909 AC098818.2-201ENST00000564925 2320 ntBASIC20.46■□□□□ 0.87
EXTL3O43909 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
EXTL3O43909 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
EXTL3O43909 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
EXTL3O43909 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC20.46■□□□□ 0.87
EXTL3O43909 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC20.46■□□□□ 0.87
EXTL3O43909 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms