Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SOX1O00570 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SOX1O00570 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC20.1■□□□□ 0.81
SOX1O00570 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
SOX1O00570 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.1■□□□□ 0.81
SOX1O00570 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SOX1O00570 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SOX1O00570 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SOX1O00570 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
SOX1O00570 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
SOX1O00570 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SOX1O00570 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SOX1O00570 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SOX1O00570 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
SOX1O00570 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC20.1■□□□□ 0.81
SOX1O00570 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SOX1O00570 AC009533.2-201ENST00000543664 586 ntBASIC20.1■□□□□ 0.81
SOX1O00570 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
SOX1O00570 MTDHP3-201ENST00000594186 672 ntBASIC20.1■□□□□ 0.81
SOX1O00570 AC114341.1-201ENST00000618070 349 ntBASIC20.1■□□□□ 0.81
SOX1O00570 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SOX1O00570 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC20.1■□□□□ 0.81
SOX1O00570 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SOX1O00570 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC20.1■□□□□ 0.81
SOX1O00570 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.1■□□□□ 0.81
SOX1O00570 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SOX1O00570 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.1■□□□□ 0.81
SOX1O00570 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
SOX1O00570 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SOX1O00570 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SOX1O00570 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SOX1O00570 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SOX1O00570 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SOX1O00570 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC20.09■□□□□ 0.81
SOX1O00570 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC20.09■□□□□ 0.81
SOX1O00570 AC007967.2-201ENST00000432613 625 ntBASIC20.09■□□□□ 0.81
SOX1O00570 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC20.09■□□□□ 0.81
SOX1O00570 MCCD1P1-208ENST00000445732 328 ntBASIC20.09■□□□□ 0.81
SOX1O00570 RNA5SP416-201ENST00000516838 111 ntBASIC20.09■□□□□ 0.81
SOX1O00570 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC20.09■□□□□ 0.81
SOX1O00570 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC20.09■□□□□ 0.81
SOX1O00570 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC20.09■□□□□ 0.81
SOX1O00570 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
SOX1O00570 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
SOX1O00570 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SOX1O00570 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SOX1O00570 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SOX1O00570 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC20.09■□□□□ 0.81
SOX1O00570 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SOX1O00570 PAN3-AS1-201ENST00000563843 1351 ntBASIC20.08■□□□□ 0.81
SOX1O00570 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SOX1O00570 AL049796.1-201ENST00000565336 1766 ntBASIC20.08■□□□□ 0.81
SOX1O00570 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SOX1O00570 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
SOX1O00570 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
SOX1O00570 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SOX1O00570 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
SOX1O00570 FP700111.2-201ENST00000619190 1892 ntBASIC20.08■□□□□ 0.81
SOX1O00570 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SOX1O00570 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
SOX1O00570 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SOX1O00570 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC20.08■□□□□ 0.81
SOX1O00570 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC20.08■□□□□ 0.81
SOX1O00570 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC20.08■□□□□ 0.81
SOX1O00570 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC20.08■□□□□ 0.81
SOX1O00570 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC20.08■□□□□ 0.81
SOX1O00570 SNHG9-202ENST00000564014 471 ntBASIC20.08■□□□□ 0.81
SOX1O00570 AC011840.4-201ENST00000578471 627 ntBASIC20.08■□□□□ 0.81
SOX1O00570 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC20.08■□□□□ 0.81
SOX1O00570 MTDHP5-201ENST00000598980 586 ntBASIC20.08■□□□□ 0.81
SOX1O00570 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SOX1O00570 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.08■□□□□ 0.8
SOX1O00570 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SOX1O00570 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SOX1O00570 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SOX1O00570 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
SOX1O00570 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SOX1O00570 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SOX1O00570 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SOX1O00570 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SOX1O00570 PTMS-202ENST00000389462 773 ntTSL 2 BASIC20.07■□□□□ 0.8
SOX1O00570 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SOX1O00570 PNMT-202ENST00000394246 821 ntTSL 2 BASIC20.07■□□□□ 0.8
SOX1O00570 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC20.07■□□□□ 0.8
SOX1O00570 RPS2P1-201ENST00000434010 821 ntBASIC20.07■□□□□ 0.8
SOX1O00570 THAP5-204ENST00000438865 868 ntTSL 2 BASIC20.07■□□□□ 0.8
SOX1O00570 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC20.07■□□□□ 0.8
SOX1O00570 CFL1-202ENST00000524553 860 ntTSL 2 BASIC20.07■□□□□ 0.8
SOX1O00570 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC20.07■□□□□ 0.8
SOX1O00570 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC20.07■□□□□ 0.8
SOX1O00570 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC20.07■□□□□ 0.8
SOX1O00570 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC20.07■□□□□ 0.8
SOX1O00570 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
SOX1O00570 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SOX1O00570 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.07■□□□□ 0.8
SOX1O00570 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SOX1O00570 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.07■□□□□ 0.8
SOX1O00570 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SOX1O00570 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SOX1O00570 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms