Protein–RNA interactions for Protein: O00300

TNFRSF11B, Tumor necrosis factor receptor superfamily member 11B, humanhuman

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11BO00300 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
TNFRSF11BO00300 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.49■□□□□ 0.39
TNFRSF11BO00300 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC17.49■□□□□ 0.39
TNFRSF11BO00300 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
TNFRSF11BO00300 MIPEPP3-201ENST00000412105 444 ntBASIC17.49■□□□□ 0.39
TNFRSF11BO00300 AL162430.1-201ENST00000480705 870 ntBASIC17.49■□□□□ 0.39
TNFRSF11BO00300 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TNFRSF11BO00300 AC126763.1-201ENST00000552015 2118 ntBASIC17.49■□□□□ 0.39
TNFRSF11BO00300 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC17.49■□□□□ 0.39
TNFRSF11BO00300 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TNFRSF11BO00300 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TNFRSF11BO00300 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TNFRSF11BO00300 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TNFRSF11BO00300 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
TNFRSF11BO00300 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.49■□□□□ 0.39
TNFRSF11BO00300 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
TNFRSF11BO00300 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TNFRSF11BO00300 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TNFRSF11BO00300 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TNFRSF11BO00300 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.49■□□□□ 0.39
TNFRSF11BO00300 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
TNFRSF11BO00300 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TNFRSF11BO00300 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.48■□□□□ 0.39
TNFRSF11BO00300 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TNFRSF11BO00300 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
TNFRSF11BO00300 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TNFRSF11BO00300 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC17.48■□□□□ 0.39
TNFRSF11BO00300 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TNFRSF11BO00300 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TNFRSF11BO00300 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.48■□□□□ 0.39
TNFRSF11BO00300 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
TNFRSF11BO00300 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TNFRSF11BO00300 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TNFRSF11BO00300 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.48■□□□□ 0.39
TNFRSF11BO00300 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TNFRSF11BO00300 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
TNFRSF11BO00300 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC17.48■□□□□ 0.39
TNFRSF11BO00300 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC17.48■□□□□ 0.39
TNFRSF11BO00300 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC17.48■□□□□ 0.39
TNFRSF11BO00300 AC080038.1-201ENST00000611274 1154 ntBASIC17.48■□□□□ 0.39
TNFRSF11BO00300 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC17.48■□□□□ 0.39
TNFRSF11BO00300 AC073111.5-205ENST00000641717 521 ntBASIC17.48■□□□□ 0.39
TNFRSF11BO00300 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
TNFRSF11BO00300 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TNFRSF11BO00300 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TNFRSF11BO00300 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TNFRSF11BO00300 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.48■□□□□ 0.39
TNFRSF11BO00300 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TNFRSF11BO00300 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC17.48■□□□□ 0.39
TNFRSF11BO00300 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
TNFRSF11BO00300 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TNFRSF11BO00300 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.48■□□□□ 0.39
TNFRSF11BO00300 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TNFRSF11BO00300 LTB4R2-202ENST00000528054 3092 ntBASIC17.48■□□□□ 0.39
TNFRSF11BO00300 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
TNFRSF11BO00300 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.48■□□□□ 0.39
TNFRSF11BO00300 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
TNFRSF11BO00300 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TNFRSF11BO00300 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TNFRSF11BO00300 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
TNFRSF11BO00300 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TNFRSF11BO00300 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TNFRSF11BO00300 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
TNFRSF11BO00300 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
TNFRSF11BO00300 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TNFRSF11BO00300 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TNFRSF11BO00300 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
TNFRSF11BO00300 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.47■□□□□ 0.39
TNFRSF11BO00300 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TNFRSF11BO00300 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TNFRSF11BO00300 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TNFRSF11BO00300 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TNFRSF11BO00300 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TNFRSF11BO00300 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC17.47■□□□□ 0.39
TNFRSF11BO00300 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TNFRSF11BO00300 TSPY21P-201ENST00000433481 731 ntBASIC17.47■□□□□ 0.39
TNFRSF11BO00300 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC17.47■□□□□ 0.39
TNFRSF11BO00300 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TNFRSF11BO00300 ABHD17AP6-201ENST00000458502 1044 ntBASIC17.47■□□□□ 0.39
TNFRSF11BO00300 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC17.47■□□□□ 0.39
TNFRSF11BO00300 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC17.47■□□□□ 0.39
TNFRSF11BO00300 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC17.47■□□□□ 0.39
TNFRSF11BO00300 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TNFRSF11BO00300 RARRES2P6-201ENST00000567333 442 ntBASIC17.47■□□□□ 0.39
TNFRSF11BO00300 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC17.47■□□□□ 0.39
TNFRSF11BO00300 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC17.47■□□□□ 0.39
TNFRSF11BO00300 AC022517.1-201ENST00000592429 346 ntBASIC17.47■□□□□ 0.39
TNFRSF11BO00300 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC17.47■□□□□ 0.39
TNFRSF11BO00300 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
TNFRSF11BO00300 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.47■□□□□ 0.39
TNFRSF11BO00300 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TNFRSF11BO00300 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TNFRSF11BO00300 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TNFRSF11BO00300 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
TNFRSF11BO00300 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.47■□□□□ 0.39
TNFRSF11BO00300 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TNFRSF11BO00300 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
TNFRSF11BO00300 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.47■□□□□ 0.39
TNFRSF11BO00300 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TNFRSF11BO00300 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms