Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
AP3B1O00203 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
AP3B1O00203 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
AP3B1O00203 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
AP3B1O00203 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC19.1■□□□□ 0.65
AP3B1O00203 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC19.1■□□□□ 0.65
AP3B1O00203 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC19.1■□□□□ 0.65
AP3B1O00203 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC19.1■□□□□ 0.65
AP3B1O00203 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
AP3B1O00203 AF186192.3-201ENST00000583427 947 ntBASIC19.1■□□□□ 0.65
AP3B1O00203 MYC-208ENST00000641036 567 ntBASIC19.1■□□□□ 0.65
AP3B1O00203 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
AP3B1O00203 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
AP3B1O00203 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
AP3B1O00203 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
AP3B1O00203 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC19.1■□□□□ 0.65
AP3B1O00203 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
AP3B1O00203 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
AP3B1O00203 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC19.1■□□□□ 0.65
AP3B1O00203 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
AP3B1O00203 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
AP3B1O00203 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.09■□□□□ 0.65
AP3B1O00203 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
AP3B1O00203 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
AP3B1O00203 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
AP3B1O00203 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
AP3B1O00203 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
AP3B1O00203 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
AP3B1O00203 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC19.09■□□□□ 0.65
AP3B1O00203 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
AP3B1O00203 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
AP3B1O00203 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
AP3B1O00203 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
AP3B1O00203 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
AP3B1O00203 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
AP3B1O00203 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC19.09■□□□□ 0.65
AP3B1O00203 AC091390.4-202ENST00000476426 537 ntBASIC19.09■□□□□ 0.65
AP3B1O00203 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
AP3B1O00203 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
AP3B1O00203 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19.09■□□□□ 0.65
AP3B1O00203 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC19.09■□□□□ 0.65
AP3B1O00203 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
AP3B1O00203 WIZP1-201ENST00000531444 2299 ntBASIC19.09■□□□□ 0.65
AP3B1O00203 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
AP3B1O00203 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
AP3B1O00203 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
AP3B1O00203 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
AP3B1O00203 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.09■□□□□ 0.65
AP3B1O00203 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
AP3B1O00203 AC090164.3-201ENST00000610780 2143 ntBASIC19.09■□□□□ 0.65
AP3B1O00203 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC19.09■□□□□ 0.65
AP3B1O00203 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
AP3B1O00203 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
AP3B1O00203 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
AP3B1O00203 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.65
AP3B1O00203 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
AP3B1O00203 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
AP3B1O00203 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
AP3B1O00203 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
AP3B1O00203 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
AP3B1O00203 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.65
AP3B1O00203 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
AP3B1O00203 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
AP3B1O00203 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC19.08■□□□□ 0.64
AP3B1O00203 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC19.08■□□□□ 0.64
AP3B1O00203 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
AP3B1O00203 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC19.08■□□□□ 0.64
AP3B1O00203 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
AP3B1O00203 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
AP3B1O00203 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
AP3B1O00203 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC19.08■□□□□ 0.64
AP3B1O00203 FAM197Y4-202ENST00000622692 608 ntBASIC19.08■□□□□ 0.64
AP3B1O00203 CR392000.1-201ENST00000624770 1228 ntBASIC19.08■□□□□ 0.64
AP3B1O00203 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC19.08■□□□□ 0.64
AP3B1O00203 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
AP3B1O00203 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
AP3B1O00203 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
AP3B1O00203 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
AP3B1O00203 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
AP3B1O00203 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
AP3B1O00203 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
AP3B1O00203 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
AP3B1O00203 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
AP3B1O00203 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC19.08■□□□□ 0.64
AP3B1O00203 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.08■□□□□ 0.64
AP3B1O00203 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
AP3B1O00203 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
AP3B1O00203 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.07■□□□□ 0.64
AP3B1O00203 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
AP3B1O00203 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
AP3B1O00203 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.07■□□□□ 0.64
AP3B1O00203 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.07■□□□□ 0.64
AP3B1O00203 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
AP3B1O00203 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.07■□□□□ 0.64
AP3B1O00203 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
AP3B1O00203 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
AP3B1O00203 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
AP3B1O00203 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
AP3B1O00203 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
AP3B1O00203 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms