Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC16.74■□□□□ 0.27
NPIPB4C9JG80 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
NPIPB4C9JG80 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NPIPB4C9JG80 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NPIPB4C9JG80 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC16.73■□□□□ 0.27
NPIPB4C9JG80 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC16.73■□□□□ 0.27
NPIPB4C9JG80 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NPIPB4C9JG80 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NPIPB4C9JG80 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC16.73■□□□□ 0.27
NPIPB4C9JG80 KRT8P45-201ENST00000414328 1447 ntBASIC16.73■□□□□ 0.27
NPIPB4C9JG80 AC112777.1-201ENST00000540175 1423 ntBASIC16.73■□□□□ 0.27
NPIPB4C9JG80 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NPIPB4C9JG80 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NPIPB4C9JG80 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC16.73■□□□□ 0.27
NPIPB4C9JG80 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC16.73■□□□□ 0.27
NPIPB4C9JG80 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC16.73■□□□□ 0.27
NPIPB4C9JG80 MDFI-202ENST00000373050 809 ntTSL 2 BASIC16.73■□□□□ 0.27
NPIPB4C9JG80 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
NPIPB4C9JG80 MIR718-201ENST00000390190 70 ntBASIC16.73■□□□□ 0.27
NPIPB4C9JG80 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
NPIPB4C9JG80 MFAP1P1-201ENST00000442257 1255 ntBASIC16.73■□□□□ 0.27
NPIPB4C9JG80 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC16.73■□□□□ 0.27
NPIPB4C9JG80 PENK-204ENST00000518770 863 ntTSL 2 BASIC16.73■□□□□ 0.27
NPIPB4C9JG80 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC16.73■□□□□ 0.27
NPIPB4C9JG80 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC16.73■□□□□ 0.27
NPIPB4C9JG80 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC16.73■□□□□ 0.27
NPIPB4C9JG80 USP36-216ENST00000589424 970 ntTSL 5 BASIC16.73■□□□□ 0.27
NPIPB4C9JG80 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NPIPB4C9JG80 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NPIPB4C9JG80 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC16.73■□□□□ 0.27
NPIPB4C9JG80 RCC2P3-201ENST00000418112 1537 ntBASIC16.73■□□□□ 0.27
NPIPB4C9JG80 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NPIPB4C9JG80 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NPIPB4C9JG80 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NPIPB4C9JG80 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NPIPB4C9JG80 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
NPIPB4C9JG80 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NPIPB4C9JG80 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NPIPB4C9JG80 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
NPIPB4C9JG80 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NPIPB4C9JG80 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
NPIPB4C9JG80 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC16.73■□□□□ 0.27
NPIPB4C9JG80 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC16.73■□□□□ 0.27
NPIPB4C9JG80 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NPIPB4C9JG80 USP49-202ENST00000373010 2446 ntTSL 5 BASIC16.72■□□□□ 0.27
NPIPB4C9JG80 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NPIPB4C9JG80 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC16.72■□□□□ 0.27
NPIPB4C9JG80 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
NPIPB4C9JG80 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
NPIPB4C9JG80 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC16.72■□□□□ 0.27
NPIPB4C9JG80 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC16.72■□□□□ 0.27
NPIPB4C9JG80 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NPIPB4C9JG80 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC16.72■□□□□ 0.27
NPIPB4C9JG80 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
NPIPB4C9JG80 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NPIPB4C9JG80 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC16.72■□□□□ 0.27
NPIPB4C9JG80 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC16.72■□□□□ 0.27
NPIPB4C9JG80 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NPIPB4C9JG80 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
NPIPB4C9JG80 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NPIPB4C9JG80 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NPIPB4C9JG80 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
NPIPB4C9JG80 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NPIPB4C9JG80 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC16.72■□□□□ 0.27
NPIPB4C9JG80 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC16.72■□□□□ 0.27
NPIPB4C9JG80 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC16.72■□□□□ 0.27
NPIPB4C9JG80 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC16.72■□□□□ 0.27
NPIPB4C9JG80 GRAMD4P8-201ENST00000605465 1115 ntBASIC16.72■□□□□ 0.27
NPIPB4C9JG80 AC026471.5-201ENST00000615068 467 ntBASIC16.72■□□□□ 0.27
NPIPB4C9JG80 REXO1L10P-201ENST00000615707 1290 ntBASIC16.72■□□□□ 0.27
NPIPB4C9JG80 REXO1L12P-201ENST00000622156 912 ntBASIC16.72■□□□□ 0.27
NPIPB4C9JG80 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC16.72■□□□□ 0.27
NPIPB4C9JG80 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NPIPB4C9JG80 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
NPIPB4C9JG80 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NPIPB4C9JG80 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC16.72■□□□□ 0.27
NPIPB4C9JG80 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
NPIPB4C9JG80 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC16.72■□□□□ 0.27
NPIPB4C9JG80 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC16.72■□□□□ 0.27
NPIPB4C9JG80 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
NPIPB4C9JG80 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC16.72■□□□□ 0.27
NPIPB4C9JG80 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NPIPB4C9JG80 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NPIPB4C9JG80 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NPIPB4C9JG80 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NPIPB4C9JG80 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NPIPB4C9JG80 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
NPIPB4C9JG80 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC16.71■□□□□ 0.27
NPIPB4C9JG80 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NPIPB4C9JG80 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NPIPB4C9JG80 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NPIPB4C9JG80 AL355355.2-201ENST00000442321 338 ntBASIC16.71■□□□□ 0.27
NPIPB4C9JG80 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NPIPB4C9JG80 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
NPIPB4C9JG80 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC16.71■□□□□ 0.27
NPIPB4C9JG80 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC16.71■□□□□ 0.27
NPIPB4C9JG80 SLC25A1P4-201ENST00000567977 778 ntBASIC16.71■□□□□ 0.27
NPIPB4C9JG80 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NPIPB4C9JG80 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
NPIPB4C9JG80 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms