Protein–RNA interactions for Protein: A8MV65

VGLL3, Transcription cofactor vestigial-like protein 3, humanhuman

Predictions only

Length 326 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL3A8MV65 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VGLL3A8MV65 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC18.54■□□□□ 0.56
VGLL3A8MV65 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
VGLL3A8MV65 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC18.54■□□□□ 0.56
VGLL3A8MV65 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
VGLL3A8MV65 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VGLL3A8MV65 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
VGLL3A8MV65 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VGLL3A8MV65 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
VGLL3A8MV65 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
VGLL3A8MV65 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC18.54■□□□□ 0.56
VGLL3A8MV65 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.54■□□□□ 0.56
VGLL3A8MV65 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
VGLL3A8MV65 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
VGLL3A8MV65 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VGLL3A8MV65 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VGLL3A8MV65 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC18.54■□□□□ 0.56
VGLL3A8MV65 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VGLL3A8MV65 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
VGLL3A8MV65 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC18.54■□□□□ 0.56
VGLL3A8MV65 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
VGLL3A8MV65 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
VGLL3A8MV65 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
VGLL3A8MV65 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
VGLL3A8MV65 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
VGLL3A8MV65 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC18.53■□□□□ 0.56
VGLL3A8MV65 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
VGLL3A8MV65 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
VGLL3A8MV65 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
VGLL3A8MV65 AL022069.1-201ENST00000568025 1636 ntBASIC18.53■□□□□ 0.56
VGLL3A8MV65 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
VGLL3A8MV65 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.53■□□□□ 0.56
VGLL3A8MV65 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC18.53■□□□□ 0.56
VGLL3A8MV65 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
VGLL3A8MV65 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC18.53■□□□□ 0.56
VGLL3A8MV65 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
VGLL3A8MV65 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
VGLL3A8MV65 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
VGLL3A8MV65 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
VGLL3A8MV65 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
VGLL3A8MV65 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
VGLL3A8MV65 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
VGLL3A8MV65 AL122018.1-201ENST00000446607 2310 ntBASIC18.53■□□□□ 0.56
VGLL3A8MV65 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
VGLL3A8MV65 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
VGLL3A8MV65 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
VGLL3A8MV65 AC131274.2-201ENST00000580697 1507 ntBASIC18.53■□□□□ 0.56
VGLL3A8MV65 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
VGLL3A8MV65 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC18.53■□□□□ 0.56
VGLL3A8MV65 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
VGLL3A8MV65 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
VGLL3A8MV65 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC18.53■□□□□ 0.56
VGLL3A8MV65 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
VGLL3A8MV65 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.53■□□□□ 0.56
VGLL3A8MV65 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18.53■□□□□ 0.56
VGLL3A8MV65 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
VGLL3A8MV65 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
VGLL3A8MV65 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
VGLL3A8MV65 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
VGLL3A8MV65 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
VGLL3A8MV65 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
VGLL3A8MV65 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
VGLL3A8MV65 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC18.52■□□□□ 0.56
VGLL3A8MV65 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
VGLL3A8MV65 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC18.52■□□□□ 0.56
VGLL3A8MV65 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC18.52■□□□□ 0.56
VGLL3A8MV65 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC18.52■□□□□ 0.56
VGLL3A8MV65 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
VGLL3A8MV65 CD72-202ENST00000378430 585 ntTSL 3 BASIC18.52■□□□□ 0.56
VGLL3A8MV65 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC18.52■□□□□ 0.56
VGLL3A8MV65 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
VGLL3A8MV65 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
VGLL3A8MV65 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC18.52■□□□□ 0.56
VGLL3A8MV65 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.52■□□□□ 0.56
VGLL3A8MV65 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.55
VGLL3A8MV65 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC18.52■□□□□ 0.55
VGLL3A8MV65 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
VGLL3A8MV65 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
VGLL3A8MV65 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC18.52■□□□□ 0.55
VGLL3A8MV65 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC18.52■□□□□ 0.55
VGLL3A8MV65 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
VGLL3A8MV65 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.55
VGLL3A8MV65 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC18.52■□□□□ 0.55
VGLL3A8MV65 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
VGLL3A8MV65 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
VGLL3A8MV65 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
VGLL3A8MV65 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.55
VGLL3A8MV65 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
VGLL3A8MV65 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.55
VGLL3A8MV65 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.55
VGLL3A8MV65 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
VGLL3A8MV65 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC18.51■□□□□ 0.55
VGLL3A8MV65 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
VGLL3A8MV65 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
VGLL3A8MV65 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC18.51■□□□□ 0.55
VGLL3A8MV65 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
VGLL3A8MV65 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
VGLL3A8MV65 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
VGLL3A8MV65 TFPT-201ENST00000391757 774 ntTSL 5 BASIC18.51■□□□□ 0.55
VGLL3A8MV65 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms