Protein–RNA interactions for Protein: A6NMK7

CPSF4L, Putative cleavage and polyadenylation specificity factor subunit 4-like protein, humanhuman

Known RBP Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4LA6NMK7 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
CPSF4LA6NMK7 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC17.46■□□□□ 0.39
CPSF4LA6NMK7 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC17.46■□□□□ 0.39
CPSF4LA6NMK7 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC17.46■□□□□ 0.39
CPSF4LA6NMK7 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CPSF4LA6NMK7 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CPSF4LA6NMK7 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CPSF4LA6NMK7 AC005082.1-201ENST00000413042 2259 ntBASIC17.46■□□□□ 0.39
CPSF4LA6NMK7 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CPSF4LA6NMK7 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CPSF4LA6NMK7 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CPSF4LA6NMK7 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.38
CPSF4LA6NMK7 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CPSF4LA6NMK7 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CPSF4LA6NMK7 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.45■□□□□ 0.38
CPSF4LA6NMK7 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CPSF4LA6NMK7 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.45■□□□□ 0.38
CPSF4LA6NMK7 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CPSF4LA6NMK7 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC17.45■□□□□ 0.38
CPSF4LA6NMK7 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.45■□□□□ 0.38
CPSF4LA6NMK7 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CPSF4LA6NMK7 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CPSF4LA6NMK7 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.45■□□□□ 0.38
CPSF4LA6NMK7 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.45■□□□□ 0.38
CPSF4LA6NMK7 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CPSF4LA6NMK7 ID1-201ENST00000376105 1233 ntBASIC17.45■□□□□ 0.38
CPSF4LA6NMK7 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CPSF4LA6NMK7 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CPSF4LA6NMK7 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC17.45■□□□□ 0.38
CPSF4LA6NMK7 TSPY23P-201ENST00000440136 739 ntBASIC17.45■□□□□ 0.38
CPSF4LA6NMK7 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC17.45■□□□□ 0.38
CPSF4LA6NMK7 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC17.45■□□□□ 0.38
CPSF4LA6NMK7 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC17.45■□□□□ 0.38
CPSF4LA6NMK7 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
CPSF4LA6NMK7 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
CPSF4LA6NMK7 AL023875.1-201ENST00000640777 796 ntBASIC17.45■□□□□ 0.38
CPSF4LA6NMK7 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CPSF4LA6NMK7 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CPSF4LA6NMK7 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CPSF4LA6NMK7 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CPSF4LA6NMK7 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC17.45■□□□□ 0.38
CPSF4LA6NMK7 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.45■□□□□ 0.38
CPSF4LA6NMK7 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CPSF4LA6NMK7 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.44■□□□□ 0.38
CPSF4LA6NMK7 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CPSF4LA6NMK7 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.44■□□□□ 0.38
CPSF4LA6NMK7 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
CPSF4LA6NMK7 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CPSF4LA6NMK7 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC17.44■□□□□ 0.38
CPSF4LA6NMK7 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CPSF4LA6NMK7 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CPSF4LA6NMK7 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CPSF4LA6NMK7 KRASP1-201ENST00000407852 552 ntBASIC17.44■□□□□ 0.38
CPSF4LA6NMK7 AC239809.2-201ENST00000415381 517 ntBASIC17.44■□□□□ 0.38
CPSF4LA6NMK7 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC17.44■□□□□ 0.38
CPSF4LA6NMK7 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC17.44■□□□□ 0.38
CPSF4LA6NMK7 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.44■□□□□ 0.38
CPSF4LA6NMK7 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CPSF4LA6NMK7 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CPSF4LA6NMK7 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CPSF4LA6NMK7 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.44■□□□□ 0.38
CPSF4LA6NMK7 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CPSF4LA6NMK7 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CPSF4LA6NMK7 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
CPSF4LA6NMK7 AC090164.3-201ENST00000610780 2143 ntBASIC17.44■□□□□ 0.38
CPSF4LA6NMK7 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
CPSF4LA6NMK7 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CPSF4LA6NMK7 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CPSF4LA6NMK7 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CPSF4LA6NMK7 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.43■□□□□ 0.38
CPSF4LA6NMK7 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.43■□□□□ 0.38
CPSF4LA6NMK7 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CPSF4LA6NMK7 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CPSF4LA6NMK7 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC17.43■□□□□ 0.38
CPSF4LA6NMK7 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CPSF4LA6NMK7 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CPSF4LA6NMK7 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CPSF4LA6NMK7 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CPSF4LA6NMK7 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CPSF4LA6NMK7 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.43■□□□□ 0.38
CPSF4LA6NMK7 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CPSF4LA6NMK7 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CPSF4LA6NMK7 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CPSF4LA6NMK7 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC17.43■□□□□ 0.38
CPSF4LA6NMK7 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC17.43■□□□□ 0.38
CPSF4LA6NMK7 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC17.43■□□□□ 0.38
CPSF4LA6NMK7 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC17.43■□□□□ 0.38
CPSF4LA6NMK7 EMC9-206ENST00000560403 872 ntTSL 2 BASIC17.43■□□□□ 0.38
CPSF4LA6NMK7 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CPSF4LA6NMK7 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC17.43■□□□□ 0.38
CPSF4LA6NMK7 AC083906.6-201ENST00000641366 219 ntBASIC17.43■□□□□ 0.38
CPSF4LA6NMK7 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CPSF4LA6NMK7 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CPSF4LA6NMK7 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
CPSF4LA6NMK7 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CPSF4LA6NMK7 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CPSF4LA6NMK7 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CPSF4LA6NMK7 ANO7L1-203ENST00000602586 1720 ntBASIC17.43■□□□□ 0.38
CPSF4LA6NMK7 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CPSF4LA6NMK7 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms