Protein–RNA interactions for Protein: A6NM62

LRRC53, Leucine-rich repeat-containing protein 53, humanhuman

Predictions only

Length 1,247 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC53A6NM62 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LRRC53A6NM62 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LRRC53A6NM62 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LRRC53A6NM62 AC079598.2-202ENST00000546624 1451 ntBASIC20.39■□□□□ 0.85
LRRC53A6NM62 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC20.39■□□□□ 0.85
LRRC53A6NM62 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC20.39■□□□□ 0.85
LRRC53A6NM62 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
LRRC53A6NM62 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LRRC53A6NM62 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LRRC53A6NM62 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
LRRC53A6NM62 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
LRRC53A6NM62 KRT16P5-201ENST00000455284 522 ntBASIC20.39■□□□□ 0.85
LRRC53A6NM62 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC20.39■□□□□ 0.85
LRRC53A6NM62 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC20.39■□□□□ 0.85
LRRC53A6NM62 LY6E-205ENST00000519611 635 ntTSL 3 BASIC20.39■□□□□ 0.85
LRRC53A6NM62 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.85
LRRC53A6NM62 MMAB-206ENST00000540016 945 ntTSL 3 BASIC20.39■□□□□ 0.85
LRRC53A6NM62 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
LRRC53A6NM62 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LRRC53A6NM62 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LRRC53A6NM62 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LRRC53A6NM62 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LRRC53A6NM62 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC20.39■□□□□ 0.85
LRRC53A6NM62 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LRRC53A6NM62 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
LRRC53A6NM62 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC20.39■□□□□ 0.85
LRRC53A6NM62 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LRRC53A6NM62 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
LRRC53A6NM62 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LRRC53A6NM62 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
LRRC53A6NM62 HEIH-201ENST00000623091 1652 ntBASIC20.38■□□□□ 0.85
LRRC53A6NM62 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
LRRC53A6NM62 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC20.38■□□□□ 0.85
LRRC53A6NM62 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC20.38■□□□□ 0.85
LRRC53A6NM62 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LRRC53A6NM62 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
LRRC53A6NM62 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC20.38■□□□□ 0.85
LRRC53A6NM62 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LRRC53A6NM62 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LRRC53A6NM62 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC20.38■□□□□ 0.85
LRRC53A6NM62 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
LRRC53A6NM62 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LRRC53A6NM62 ID1-201ENST00000376105 1233 ntBASIC20.38■□□□□ 0.85
LRRC53A6NM62 POU5F1P3-201ENST00000428824 1078 ntBASIC20.38■□□□□ 0.85
LRRC53A6NM62 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
LRRC53A6NM62 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC20.38■□□□□ 0.85
LRRC53A6NM62 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC20.38■□□□□ 0.85
LRRC53A6NM62 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC20.38■□□□□ 0.85
LRRC53A6NM62 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
LRRC53A6NM62 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
LRRC53A6NM62 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
LRRC53A6NM62 MADD-208ENST00000405573 1823 ntTSL 5 BASIC20.38■□□□□ 0.85
LRRC53A6NM62 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC20.38■□□□□ 0.85
LRRC53A6NM62 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
LRRC53A6NM62 RCC2P6-201ENST00000526625 1557 ntBASIC20.38■□□□□ 0.85
LRRC53A6NM62 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
LRRC53A6NM62 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC20.37■□□□□ 0.85
LRRC53A6NM62 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LRRC53A6NM62 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LRRC53A6NM62 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
LRRC53A6NM62 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LRRC53A6NM62 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LRRC53A6NM62 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC20.37■□□□□ 0.85
LRRC53A6NM62 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC20.37■□□□□ 0.85
LRRC53A6NM62 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LRRC53A6NM62 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
LRRC53A6NM62 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LRRC53A6NM62 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LRRC53A6NM62 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LRRC53A6NM62 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
LRRC53A6NM62 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LRRC53A6NM62 KRT8P11-201ENST00000409686 1436 ntBASIC20.36■□□□□ 0.85
LRRC53A6NM62 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
LRRC53A6NM62 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC20.36■□□□□ 0.85
LRRC53A6NM62 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC20.36■□□□□ 0.85
LRRC53A6NM62 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LRRC53A6NM62 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
LRRC53A6NM62 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
LRRC53A6NM62 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
LRRC53A6NM62 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
LRRC53A6NM62 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LRRC53A6NM62 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC20.36■□□□□ 0.85
LRRC53A6NM62 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LRRC53A6NM62 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC20.36■□□□□ 0.85
LRRC53A6NM62 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LRRC53A6NM62 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
LRRC53A6NM62 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC20.36■□□□□ 0.85
LRRC53A6NM62 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LRRC53A6NM62 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC20.36■□□□□ 0.85
LRRC53A6NM62 GLRB-205ENST00000512619 728 ntTSL 3 BASIC20.36■□□□□ 0.85
LRRC53A6NM62 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC20.36■□□□□ 0.85
LRRC53A6NM62 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC20.36■□□□□ 0.85
LRRC53A6NM62 AC124016.1-201ENST00000609552 612 ntBASIC20.36■□□□□ 0.85
LRRC53A6NM62 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LRRC53A6NM62 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LRRC53A6NM62 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LRRC53A6NM62 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC20.36■□□□□ 0.85
LRRC53A6NM62 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC20.36■□□□□ 0.85
LRRC53A6NM62 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC20.36■□□□□ 0.85
LRRC53A6NM62 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms