Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC13.35□□□□□ -0.27
LINC01546A6NGU7 HLA-DQB1-201ENST00000374943 1656 ntBASIC13.35□□□□□ -0.27
LINC01546A6NGU7 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
LINC01546A6NGU7 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LINC01546A6NGU7 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LINC01546A6NGU7 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC13.35□□□□□ -0.27
LINC01546A6NGU7 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
LINC01546A6NGU7 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LINC01546A6NGU7 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
LINC01546A6NGU7 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC13.35□□□□□ -0.27
LINC01546A6NGU7 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC13.35□□□□□ -0.27
LINC01546A6NGU7 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LINC01546A6NGU7 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC13.35□□□□□ -0.27
LINC01546A6NGU7 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
LINC01546A6NGU7 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LINC01546A6NGU7 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LINC01546A6NGU7 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC13.35□□□□□ -0.27
LINC01546A6NGU7 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LINC01546A6NGU7 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
LINC01546A6NGU7 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LINC01546A6NGU7 AC008556.1-201ENST00000610908 2040 ntBASIC13.35□□□□□ -0.27
LINC01546A6NGU7 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
LINC01546A6NGU7 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LINC01546A6NGU7 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
LINC01546A6NGU7 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC13.35□□□□□ -0.27
LINC01546A6NGU7 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC13.35□□□□□ -0.27
LINC01546A6NGU7 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LINC01546A6NGU7 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LINC01546A6NGU7 PP12613-201ENST00000424958 2230 ntBASIC13.35□□□□□ -0.27
LINC01546A6NGU7 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC13.35□□□□□ -0.27
LINC01546A6NGU7 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
LINC01546A6NGU7 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC01546A6NGU7 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC01546A6NGU7 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC13.34□□□□□ -0.27
LINC01546A6NGU7 REXO1L9P-201ENST00000604264 2108 ntBASIC13.34□□□□□ -0.27
LINC01546A6NGU7 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC13.34□□□□□ -0.27
LINC01546A6NGU7 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC01546A6NGU7 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LINC01546A6NGU7 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LINC01546A6NGU7 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC01546A6NGU7 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC13.34□□□□□ -0.27
LINC01546A6NGU7 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
LINC01546A6NGU7 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LINC01546A6NGU7 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC13.34□□□□□ -0.27
LINC01546A6NGU7 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC13.34□□□□□ -0.27
LINC01546A6NGU7 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC13.34□□□□□ -0.27
LINC01546A6NGU7 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC01546A6NGU7 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC01546A6NGU7 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
LINC01546A6NGU7 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
LINC01546A6NGU7 AC006116.8-202ENST00000587620 1550 ntBASIC13.34□□□□□ -0.27
LINC01546A6NGU7 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC13.34□□□□□ -0.27
LINC01546A6NGU7 KRT8P45-201ENST00000414328 1447 ntBASIC13.34□□□□□ -0.27
LINC01546A6NGU7 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LINC01546A6NGU7 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LINC01546A6NGU7 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC01546A6NGU7 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC01546A6NGU7 PARP1-202ENST00000366792 553 ntTSL 3 BASIC13.34□□□□□ -0.27
LINC01546A6NGU7 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC01546A6NGU7 KRT19P1-201ENST00000405746 1186 ntBASIC13.34□□□□□ -0.27
LINC01546A6NGU7 YBX1P10-201ENST00000444752 975 ntBASIC13.34□□□□□ -0.27
LINC01546A6NGU7 AL031432.3-201ENST00000607698 485 ntBASIC13.34□□□□□ -0.27
LINC01546A6NGU7 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
LINC01546A6NGU7 AC068587.9-201ENST00000641814 219 ntBASIC13.34□□□□□ -0.27
LINC01546A6NGU7 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LINC01546A6NGU7 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC13.34□□□□□ -0.27
LINC01546A6NGU7 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC01546A6NGU7 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC01546A6NGU7 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC01546A6NGU7 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LINC01546A6NGU7 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC13.34□□□□□ -0.27
LINC01546A6NGU7 GOLGA6L5P-202ENST00000515341 1828 ntBASIC13.34□□□□□ -0.27
LINC01546A6NGU7 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
LINC01546A6NGU7 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC01546A6NGU7 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LINC01546A6NGU7 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC01546A6NGU7 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC01546A6NGU7 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC13.34□□□□□ -0.27
LINC01546A6NGU7 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
LINC01546A6NGU7 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC13.33□□□□□ -0.27
LINC01546A6NGU7 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
LINC01546A6NGU7 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
LINC01546A6NGU7 NKILA-202ENST00000614771 2598 ntBASIC13.33□□□□□ -0.27
LINC01546A6NGU7 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
LINC01546A6NGU7 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
LINC01546A6NGU7 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
LINC01546A6NGU7 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC01546A6NGU7 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC13.33□□□□□ -0.28
LINC01546A6NGU7 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC01546A6NGU7 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC13.33□□□□□ -0.28
LINC01546A6NGU7 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC13.33□□□□□ -0.28
LINC01546A6NGU7 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC01546A6NGU7 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC13.33□□□□□ -0.28
LINC01546A6NGU7 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LINC01546A6NGU7 AL023806.1-201ENST00000603994 1649 ntBASIC13.33□□□□□ -0.28
LINC01546A6NGU7 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC01546A6NGU7 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC01546A6NGU7 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LINC01546A6NGU7 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LINC01546A6NGU7 AC123595.1-201ENST00000440769 1046 ntBASIC13.33□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms