Protein–RNA interactions for Protein: A4FU28

CTAGE9, cTAGE family member 9, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTAGE9A4FU28 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CTAGE9A4FU28 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CTAGE9A4FU28 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
CTAGE9A4FU28 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC20.19■□□□□ 0.82
CTAGE9A4FU28 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CTAGE9A4FU28 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CTAGE9A4FU28 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CTAGE9A4FU28 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CTAGE9A4FU28 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CTAGE9A4FU28 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CTAGE9A4FU28 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CTAGE9A4FU28 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.19■□□□□ 0.82
CTAGE9A4FU28 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.19■□□□□ 0.82
CTAGE9A4FU28 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.19■□□□□ 0.82
CTAGE9A4FU28 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CTAGE9A4FU28 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CTAGE9A4FU28 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CTAGE9A4FU28 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CTAGE9A4FU28 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CTAGE9A4FU28 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CTAGE9A4FU28 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CTAGE9A4FU28 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CTAGE9A4FU28 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CTAGE9A4FU28 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC20.18■□□□□ 0.82
CTAGE9A4FU28 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CTAGE9A4FU28 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CTAGE9A4FU28 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
CTAGE9A4FU28 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CTAGE9A4FU28 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC20.18■□□□□ 0.82
CTAGE9A4FU28 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CTAGE9A4FU28 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
CTAGE9A4FU28 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
CTAGE9A4FU28 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC20.18■□□□□ 0.82
CTAGE9A4FU28 AL390719.1-204ENST00000412397 1219 ntBASIC20.18■□□□□ 0.82
CTAGE9A4FU28 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.18■□□□□ 0.82
CTAGE9A4FU28 HES2-206ENST00000489730 730 ntTSL 2 BASIC20.18■□□□□ 0.82
CTAGE9A4FU28 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CTAGE9A4FU28 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CTAGE9A4FU28 OR10C1-204ENST00000622521 1039 ntBASIC20.18■□□□□ 0.82
CTAGE9A4FU28 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CTAGE9A4FU28 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
CTAGE9A4FU28 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC20.18■□□□□ 0.82
CTAGE9A4FU28 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC20.18■□□□□ 0.82
CTAGE9A4FU28 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CTAGE9A4FU28 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CTAGE9A4FU28 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC20.18■□□□□ 0.82
CTAGE9A4FU28 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
CTAGE9A4FU28 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CTAGE9A4FU28 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CTAGE9A4FU28 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CTAGE9A4FU28 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
CTAGE9A4FU28 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CTAGE9A4FU28 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
CTAGE9A4FU28 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
CTAGE9A4FU28 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC20.17■□□□□ 0.82
CTAGE9A4FU28 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CTAGE9A4FU28 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC20.17■□□□□ 0.82
CTAGE9A4FU28 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC20.17■□□□□ 0.82
CTAGE9A4FU28 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
CTAGE9A4FU28 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
CTAGE9A4FU28 ME3-201ENST00000323418 1068 ntTSL 5 BASIC20.17■□□□□ 0.82
CTAGE9A4FU28 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC20.17■□□□□ 0.82
CTAGE9A4FU28 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.17■□□□□ 0.82
CTAGE9A4FU28 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC20.17■□□□□ 0.82
CTAGE9A4FU28 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.17■□□□□ 0.82
CTAGE9A4FU28 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC20.17■□□□□ 0.82
CTAGE9A4FU28 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CTAGE9A4FU28 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CTAGE9A4FU28 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
CTAGE9A4FU28 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
CTAGE9A4FU28 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CTAGE9A4FU28 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CTAGE9A4FU28 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CTAGE9A4FU28 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
CTAGE9A4FU28 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CTAGE9A4FU28 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CTAGE9A4FU28 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
CTAGE9A4FU28 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CTAGE9A4FU28 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CTAGE9A4FU28 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CTAGE9A4FU28 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CTAGE9A4FU28 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CTAGE9A4FU28 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CTAGE9A4FU28 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CTAGE9A4FU28 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC20.16■□□□□ 0.82
CTAGE9A4FU28 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CTAGE9A4FU28 YBX1P10-201ENST00000444752 975 ntBASIC20.16■□□□□ 0.82
CTAGE9A4FU28 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CTAGE9A4FU28 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC20.16■□□□□ 0.82
CTAGE9A4FU28 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CTAGE9A4FU28 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
CTAGE9A4FU28 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CTAGE9A4FU28 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC20.16■□□□□ 0.82
CTAGE9A4FU28 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CTAGE9A4FU28 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
CTAGE9A4FU28 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
CTAGE9A4FU28 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CTAGE9A4FU28 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CTAGE9A4FU28 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
CTAGE9A4FU28 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms