Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
CCDC66A2RUB6 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC20.43■□□□□ 0.86
CCDC66A2RUB6 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
CCDC66A2RUB6 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC20.43■□□□□ 0.86
CCDC66A2RUB6 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC66A2RUB6 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC20.43■□□□□ 0.86
CCDC66A2RUB6 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC66A2RUB6 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC66A2RUB6 FST-202ENST00000396947 2538 ntTSL 5 BASIC20.43■□□□□ 0.86
CCDC66A2RUB6 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC20.43■□□□□ 0.86
CCDC66A2RUB6 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC20.42■□□□□ 0.86
CCDC66A2RUB6 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC66A2RUB6 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC66A2RUB6 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC66A2RUB6 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC66A2RUB6 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC66A2RUB6 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC66A2RUB6 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC20.42■□□□□ 0.86
CCDC66A2RUB6 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC66A2RUB6 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC20.42■□□□□ 0.86
CCDC66A2RUB6 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
CCDC66A2RUB6 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC66A2RUB6 MFF-205ENST00000354503 1085 ntTSL 2 BASIC20.42■□□□□ 0.86
CCDC66A2RUB6 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC20.42■□□□□ 0.86
CCDC66A2RUB6 RER1-204ENST00000378518 522 ntTSL 3 BASIC20.42■□□□□ 0.86
CCDC66A2RUB6 AC026185.1-201ENST00000445748 174 ntBASIC20.42■□□□□ 0.86
CCDC66A2RUB6 NME6-213ENST00000451657 871 ntTSL 2 BASIC20.42■□□□□ 0.86
CCDC66A2RUB6 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
CCDC66A2RUB6 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC66A2RUB6 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC66A2RUB6 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC66A2RUB6 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC66A2RUB6 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC66A2RUB6 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC20.42■□□□□ 0.86
CCDC66A2RUB6 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC66A2RUB6 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC66A2RUB6 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
CCDC66A2RUB6 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
CCDC66A2RUB6 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC66A2RUB6 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC20.41■□□□□ 0.86
CCDC66A2RUB6 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC66A2RUB6 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC66A2RUB6 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC20.41■□□□□ 0.86
CCDC66A2RUB6 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC66A2RUB6 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
CCDC66A2RUB6 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC66A2RUB6 GGT1-206ENST00000404223 952 ntTSL 2 BASIC20.41■□□□□ 0.86
CCDC66A2RUB6 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.41■□□□□ 0.86
CCDC66A2RUB6 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
CCDC66A2RUB6 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC66A2RUB6 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC66A2RUB6 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC20.41■□□□□ 0.86
CCDC66A2RUB6 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC66A2RUB6 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC66A2RUB6 AL354751.1-201ENST00000412768 1863 ntBASIC20.41■□□□□ 0.86
CCDC66A2RUB6 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC66A2RUB6 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC20.41■□□□□ 0.86
CCDC66A2RUB6 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC66A2RUB6 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC66A2RUB6 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC66A2RUB6 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC66A2RUB6 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC66A2RUB6 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC66A2RUB6 HR-201ENST00000312841 5351 ntTSL 5 BASIC20.4■□□□□ 0.86
CCDC66A2RUB6 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC66A2RUB6 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
CCDC66A2RUB6 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
CCDC66A2RUB6 MIR663A-201ENST00000385250 93 ntBASIC20.4■□□□□ 0.86
CCDC66A2RUB6 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC66A2RUB6 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC20.4■□□□□ 0.86
CCDC66A2RUB6 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC66A2RUB6 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.4■□□□□ 0.86
CCDC66A2RUB6 AC141586.3-201ENST00000562166 1838 ntBASIC20.4■□□□□ 0.86
CCDC66A2RUB6 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
CCDC66A2RUB6 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.4■□□□□ 0.86
CCDC66A2RUB6 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.4■□□□□ 0.86
CCDC66A2RUB6 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC66A2RUB6 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
CCDC66A2RUB6 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC20.4■□□□□ 0.86
CCDC66A2RUB6 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
CCDC66A2RUB6 AC090164.3-201ENST00000610780 2143 ntBASIC20.39■□□□□ 0.86
CCDC66A2RUB6 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CCDC66A2RUB6 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CCDC66A2RUB6 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CCDC66A2RUB6 ZNF815P-204ENST00000434898 1737 ntBASIC20.39■□□□□ 0.86
CCDC66A2RUB6 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC20.39■□□□□ 0.85
CCDC66A2RUB6 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
CCDC66A2RUB6 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC66A2RUB6 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC66A2RUB6 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC66A2RUB6 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.39■□□□□ 0.85
CCDC66A2RUB6 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
CCDC66A2RUB6 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC20.39■□□□□ 0.85
CCDC66A2RUB6 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.39■□□□□ 0.85
CCDC66A2RUB6 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC66A2RUB6 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC66A2RUB6 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC20.39■□□□□ 0.85
CCDC66A2RUB6 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC66A2RUB6 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC20.39■□□□□ 0.85
CCDC66A2RUB6 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms