Protein–RNA interactions for Protein: A1A4V9

CCDC189, Coiled-coil domain-containing protein 189, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189A1A4V9 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
CCDC189A1A4V9 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC189A1A4V9 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.9■□□□□ 0.62
CCDC189A1A4V9 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.9■□□□□ 0.62
CCDC189A1A4V9 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CCDC189A1A4V9 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.9■□□□□ 0.62
CCDC189A1A4V9 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC189A1A4V9 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CCDC189A1A4V9 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC189A1A4V9 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC189A1A4V9 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC18.9■□□□□ 0.62
CCDC189A1A4V9 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC18.9■□□□□ 0.62
CCDC189A1A4V9 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.9■□□□□ 0.62
CCDC189A1A4V9 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.9■□□□□ 0.62
CCDC189A1A4V9 AC098934.4-201ENST00000564127 592 ntBASIC18.9■□□□□ 0.62
CCDC189A1A4V9 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC189A1A4V9 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC189A1A4V9 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC189A1A4V9 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
CCDC189A1A4V9 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
CCDC189A1A4V9 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC18.9■□□□□ 0.62
CCDC189A1A4V9 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC189A1A4V9 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC189A1A4V9 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.9■□□□□ 0.62
CCDC189A1A4V9 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC189A1A4V9 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC189A1A4V9 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC189A1A4V9 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
CCDC189A1A4V9 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
CCDC189A1A4V9 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC189A1A4V9 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC18.89■□□□□ 0.62
CCDC189A1A4V9 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.62
CCDC189A1A4V9 AL596257.1-201ENST00000641463 2694 ntBASIC18.89■□□□□ 0.62
CCDC189A1A4V9 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.89■□□□□ 0.62
CCDC189A1A4V9 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC189A1A4V9 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.89■□□□□ 0.61
CCDC189A1A4V9 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC189A1A4V9 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC189A1A4V9 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.89■□□□□ 0.61
CCDC189A1A4V9 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
CCDC189A1A4V9 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC189A1A4V9 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC189A1A4V9 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC18.89■□□□□ 0.61
CCDC189A1A4V9 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.89■□□□□ 0.61
CCDC189A1A4V9 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
CCDC189A1A4V9 UNC93B5-201ENST00000530315 699 ntBASIC18.89■□□□□ 0.61
CCDC189A1A4V9 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC18.89■□□□□ 0.61
CCDC189A1A4V9 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC18.89■□□□□ 0.61
CCDC189A1A4V9 SDHAP1-207ENST00000440850 2000 ntBASIC18.89■□□□□ 0.61
CCDC189A1A4V9 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
CCDC189A1A4V9 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
CCDC189A1A4V9 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC189A1A4V9 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC18.89■□□□□ 0.61
CCDC189A1A4V9 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
CCDC189A1A4V9 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC189A1A4V9 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC18.89■□□□□ 0.61
CCDC189A1A4V9 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC189A1A4V9 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC189A1A4V9 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
CCDC189A1A4V9 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.88■□□□□ 0.61
CCDC189A1A4V9 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC18.88■□□□□ 0.61
CCDC189A1A4V9 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.88■□□□□ 0.61
CCDC189A1A4V9 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC18.88■□□□□ 0.61
CCDC189A1A4V9 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC189A1A4V9 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC18.88■□□□□ 0.61
CCDC189A1A4V9 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC189A1A4V9 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC189A1A4V9 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC189A1A4V9 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC189A1A4V9 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC18.88■□□□□ 0.61
CCDC189A1A4V9 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
CCDC189A1A4V9 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
CCDC189A1A4V9 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC18.88■□□□□ 0.61
CCDC189A1A4V9 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC189A1A4V9 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.88■□□□□ 0.61
CCDC189A1A4V9 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC189A1A4V9 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC189A1A4V9 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
CCDC189A1A4V9 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.88■□□□□ 0.61
CCDC189A1A4V9 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC189A1A4V9 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC189A1A4V9 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CCDC189A1A4V9 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.88■□□□□ 0.61
CCDC189A1A4V9 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.88■□□□□ 0.61
CCDC189A1A4V9 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC189A1A4V9 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC189A1A4V9 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC18.87■□□□□ 0.61
CCDC189A1A4V9 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC189A1A4V9 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC18.87■□□□□ 0.61
CCDC189A1A4V9 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC189A1A4V9 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC189A1A4V9 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
CCDC189A1A4V9 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC189A1A4V9 FEM1AP3-201ENST00000403722 1741 ntBASIC18.87■□□□□ 0.61
CCDC189A1A4V9 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
CCDC189A1A4V9 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.87■□□□□ 0.61
CCDC189A1A4V9 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
CCDC189A1A4V9 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
CCDC189A1A4V9 TSPY21P-201ENST00000433481 731 ntBASIC18.87■□□□□ 0.61
CCDC189A1A4V9 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms