Protein–RNA interactions for Protein: A0A0K0K1C4

TRBV27, T-cell receptor beta variable 27 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27A0A0K0K1C4 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC13.38□□□□□ -0.27
TRBV27A0A0K0K1C4 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC13.38□□□□□ -0.27
TRBV27A0A0K0K1C4 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
TRBV27A0A0K0K1C4 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRBV27A0A0K0K1C4 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRBV27A0A0K0K1C4 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRBV27A0A0K0K1C4 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRBV27A0A0K0K1C4 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRBV27A0A0K0K1C4 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRBV27A0A0K0K1C4 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC13.37□□□□□ -0.27
TRBV27A0A0K0K1C4 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRBV27A0A0K0K1C4 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRBV27A0A0K0K1C4 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
TRBV27A0A0K0K1C4 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
TRBV27A0A0K0K1C4 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRBV27A0A0K0K1C4 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRBV27A0A0K0K1C4 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC13.37□□□□□ -0.27
TRBV27A0A0K0K1C4 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRBV27A0A0K0K1C4 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRBV27A0A0K0K1C4 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRBV27A0A0K0K1C4 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRBV27A0A0K0K1C4 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC13.37□□□□□ -0.27
TRBV27A0A0K0K1C4 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC13.37□□□□□ -0.27
TRBV27A0A0K0K1C4 NME6-213ENST00000451657 871 ntTSL 2 BASIC13.37□□□□□ -0.27
TRBV27A0A0K0K1C4 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC13.37□□□□□ -0.27
TRBV27A0A0K0K1C4 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC13.37□□□□□ -0.27
TRBV27A0A0K0K1C4 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC13.37□□□□□ -0.27
TRBV27A0A0K0K1C4 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC13.37□□□□□ -0.27
TRBV27A0A0K0K1C4 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC13.37□□□□□ -0.27
TRBV27A0A0K0K1C4 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRBV27A0A0K0K1C4 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRBV27A0A0K0K1C4 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRBV27A0A0K0K1C4 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
TRBV27A0A0K0K1C4 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRBV27A0A0K0K1C4 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC13.37□□□□□ -0.27
TRBV27A0A0K0K1C4 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRBV27A0A0K0K1C4 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRBV27A0A0K0K1C4 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRBV27A0A0K0K1C4 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
TRBV27A0A0K0K1C4 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC13.37□□□□□ -0.27
TRBV27A0A0K0K1C4 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRBV27A0A0K0K1C4 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC13.37□□□□□ -0.27
TRBV27A0A0K0K1C4 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC13.37□□□□□ -0.27
TRBV27A0A0K0K1C4 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRBV27A0A0K0K1C4 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRBV27A0A0K0K1C4 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRBV27A0A0K0K1C4 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRBV27A0A0K0K1C4 GOLGA6L5P-202ENST00000515341 1828 ntBASIC13.36□□□□□ -0.27
TRBV27A0A0K0K1C4 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
TRBV27A0A0K0K1C4 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TRBV27A0A0K0K1C4 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC13.36□□□□□ -0.27
TRBV27A0A0K0K1C4 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRBV27A0A0K0K1C4 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC13.36□□□□□ -0.27
TRBV27A0A0K0K1C4 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TRBV27A0A0K0K1C4 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRBV27A0A0K0K1C4 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC13.36□□□□□ -0.27
TRBV27A0A0K0K1C4 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
TRBV27A0A0K0K1C4 ESPNP-201ENST00000270691 2015 ntBASIC13.36□□□□□ -0.27
TRBV27A0A0K0K1C4 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRBV27A0A0K0K1C4 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TRBV27A0A0K0K1C4 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC13.36□□□□□ -0.27
TRBV27A0A0K0K1C4 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRBV27A0A0K0K1C4 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC13.36□□□□□ -0.27
TRBV27A0A0K0K1C4 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC13.36□□□□□ -0.27
TRBV27A0A0K0K1C4 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC13.36□□□□□ -0.27
TRBV27A0A0K0K1C4 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
TRBV27A0A0K0K1C4 AC006557.6-201ENST00000623071 864 ntBASIC13.36□□□□□ -0.27
TRBV27A0A0K0K1C4 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC13.36□□□□□ -0.27
TRBV27A0A0K0K1C4 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRBV27A0A0K0K1C4 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC13.36□□□□□ -0.27
TRBV27A0A0K0K1C4 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRBV27A0A0K0K1C4 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC13.36□□□□□ -0.27
TRBV27A0A0K0K1C4 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC13.36□□□□□ -0.27
TRBV27A0A0K0K1C4 HEIH-201ENST00000623091 1652 ntBASIC13.36□□□□□ -0.27
TRBV27A0A0K0K1C4 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRBV27A0A0K0K1C4 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
TRBV27A0A0K0K1C4 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC13.36□□□□□ -0.27
TRBV27A0A0K0K1C4 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TRBV27A0A0K0K1C4 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
TRBV27A0A0K0K1C4 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRBV27A0A0K0K1C4 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC13.36□□□□□ -0.27
TRBV27A0A0K0K1C4 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRBV27A0A0K0K1C4 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC13.36□□□□□ -0.27
TRBV27A0A0K0K1C4 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRBV27A0A0K0K1C4 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRBV27A0A0K0K1C4 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRBV27A0A0K0K1C4 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
TRBV27A0A0K0K1C4 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TRBV27A0A0K0K1C4 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRBV27A0A0K0K1C4 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRBV27A0A0K0K1C4 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TRBV27A0A0K0K1C4 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC13.35□□□□□ -0.27
TRBV27A0A0K0K1C4 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TRBV27A0A0K0K1C4 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRBV27A0A0K0K1C4 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRBV27A0A0K0K1C4 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC13.35□□□□□ -0.27
TRBV27A0A0K0K1C4 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRBV27A0A0K0K1C4 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
TRBV27A0A0K0K1C4 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TRBV27A0A0K0K1C4 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms