Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
IGHV4-28A0A0C4DH34 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC13.66□□□□□ -0.22
IGHV4-28A0A0C4DH34 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
IGHV4-28A0A0C4DH34 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
IGHV4-28A0A0C4DH34 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
IGHV4-28A0A0C4DH34 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
IGHV4-28A0A0C4DH34 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC13.65□□□□□ -0.22
IGHV4-28A0A0C4DH34 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
IGHV4-28A0A0C4DH34 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
IGHV4-28A0A0C4DH34 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC13.65□□□□□ -0.22
IGHV4-28A0A0C4DH34 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
IGHV4-28A0A0C4DH34 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
IGHV4-28A0A0C4DH34 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC13.65□□□□□ -0.22
IGHV4-28A0A0C4DH34 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC13.65□□□□□ -0.22
IGHV4-28A0A0C4DH34 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
IGHV4-28A0A0C4DH34 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
IGHV4-28A0A0C4DH34 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
IGHV4-28A0A0C4DH34 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
IGHV4-28A0A0C4DH34 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC13.65□□□□□ -0.22
IGHV4-28A0A0C4DH34 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
IGHV4-28A0A0C4DH34 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
IGHV4-28A0A0C4DH34 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
IGHV4-28A0A0C4DH34 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC13.65□□□□□ -0.22
IGHV4-28A0A0C4DH34 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC13.65□□□□□ -0.22
IGHV4-28A0A0C4DH34 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC13.65□□□□□ -0.22
IGHV4-28A0A0C4DH34 CFL2-205ENST00000555765 632 ntTSL 2 BASIC13.65□□□□□ -0.22
IGHV4-28A0A0C4DH34 AC010331.1-201ENST00000611423 582 ntBASIC13.65□□□□□ -0.22
IGHV4-28A0A0C4DH34 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
IGHV4-28A0A0C4DH34 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
IGHV4-28A0A0C4DH34 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC13.65□□□□□ -0.22
IGHV4-28A0A0C4DH34 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
IGHV4-28A0A0C4DH34 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
IGHV4-28A0A0C4DH34 TEX21P-204ENST00000641479 1693 ntBASIC13.65□□□□□ -0.22
IGHV4-28A0A0C4DH34 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC13.65□□□□□ -0.22
IGHV4-28A0A0C4DH34 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
IGHV4-28A0A0C4DH34 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
IGHV4-28A0A0C4DH34 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
IGHV4-28A0A0C4DH34 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
IGHV4-28A0A0C4DH34 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
IGHV4-28A0A0C4DH34 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.23
IGHV4-28A0A0C4DH34 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
IGHV4-28A0A0C4DH34 AC073508.3-201ENST00000619697 1419 ntBASIC13.64□□□□□ -0.23
IGHV4-28A0A0C4DH34 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
IGHV4-28A0A0C4DH34 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
IGHV4-28A0A0C4DH34 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC13.64□□□□□ -0.23
IGHV4-28A0A0C4DH34 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC13.64□□□□□ -0.23
IGHV4-28A0A0C4DH34 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
IGHV4-28A0A0C4DH34 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC13.64□□□□□ -0.23
IGHV4-28A0A0C4DH34 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
IGHV4-28A0A0C4DH34 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
IGHV4-28A0A0C4DH34 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
IGHV4-28A0A0C4DH34 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
IGHV4-28A0A0C4DH34 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
IGHV4-28A0A0C4DH34 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
IGHV4-28A0A0C4DH34 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC13.64□□□□□ -0.23
IGHV4-28A0A0C4DH34 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC13.64□□□□□ -0.23
IGHV4-28A0A0C4DH34 AL512604.3-201ENST00000569583 964 ntBASIC13.64□□□□□ -0.23
IGHV4-28A0A0C4DH34 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
IGHV4-28A0A0C4DH34 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC13.64□□□□□ -0.23
IGHV4-28A0A0C4DH34 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC13.64□□□□□ -0.23
IGHV4-28A0A0C4DH34 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
IGHV4-28A0A0C4DH34 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
IGHV4-28A0A0C4DH34 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
IGHV4-28A0A0C4DH34 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
IGHV4-28A0A0C4DH34 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
IGHV4-28A0A0C4DH34 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
IGHV4-28A0A0C4DH34 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
IGHV4-28A0A0C4DH34 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
IGHV4-28A0A0C4DH34 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
IGHV4-28A0A0C4DH34 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
IGHV4-28A0A0C4DH34 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
IGHV4-28A0A0C4DH34 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
IGHV4-28A0A0C4DH34 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
IGHV4-28A0A0C4DH34 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC13.63□□□□□ -0.23
IGHV4-28A0A0C4DH34 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
IGHV4-28A0A0C4DH34 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
IGHV4-28A0A0C4DH34 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC13.63□□□□□ -0.23
IGHV4-28A0A0C4DH34 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
IGHV4-28A0A0C4DH34 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
IGHV4-28A0A0C4DH34 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
IGHV4-28A0A0C4DH34 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
IGHV4-28A0A0C4DH34 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
IGHV4-28A0A0C4DH34 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
IGHV4-28A0A0C4DH34 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC13.63□□□□□ -0.23
IGHV4-28A0A0C4DH34 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC13.63□□□□□ -0.23
IGHV4-28A0A0C4DH34 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC13.63□□□□□ -0.23
IGHV4-28A0A0C4DH34 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC13.63□□□□□ -0.23
IGHV4-28A0A0C4DH34 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC13.63□□□□□ -0.23
IGHV4-28A0A0C4DH34 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
IGHV4-28A0A0C4DH34 TBC1D3P2-202ENST00000577902 1649 ntBASIC13.63□□□□□ -0.23
IGHV4-28A0A0C4DH34 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC13.63□□□□□ -0.23
IGHV4-28A0A0C4DH34 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC13.63□□□□□ -0.23
IGHV4-28A0A0C4DH34 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
IGHV4-28A0A0C4DH34 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
IGHV4-28A0A0C4DH34 AC007952.6-201ENST00000573168 2673 ntBASIC13.63□□□□□ -0.23
IGHV4-28A0A0C4DH34 AC003957.1-201ENST00000625108 2673 ntBASIC13.63□□□□□ -0.23
IGHV4-28A0A0C4DH34 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
IGHV4-28A0A0C4DH34 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
IGHV4-28A0A0C4DH34 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
IGHV4-28A0A0C4DH34 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms