Protein–RNA interactions for Protein: A0A0B4J235

TRAV13-2, T-cell receptor alpha variable 13-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2A0A0B4J235 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
TRAV13-2A0A0B4J235 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TRAV13-2A0A0B4J235 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TRAV13-2A0A0B4J235 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TRAV13-2A0A0B4J235 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TRAV13-2A0A0B4J235 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
TRAV13-2A0A0B4J235 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
TRAV13-2A0A0B4J235 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
TRAV13-2A0A0B4J235 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC12.48□□□□□ -0.41
TRAV13-2A0A0B4J235 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC12.48□□□□□ -0.41
TRAV13-2A0A0B4J235 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC12.48□□□□□ -0.41
TRAV13-2A0A0B4J235 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TRAV13-2A0A0B4J235 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
TRAV13-2A0A0B4J235 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TRAV13-2A0A0B4J235 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC12.48□□□□□ -0.41
TRAV13-2A0A0B4J235 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TRAV13-2A0A0B4J235 AC009053.2-201ENST00000563701 2365 ntBASIC12.48□□□□□ -0.41
TRAV13-2A0A0B4J235 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TRAV13-2A0A0B4J235 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TRAV13-2A0A0B4J235 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TRAV13-2A0A0B4J235 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
TRAV13-2A0A0B4J235 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
TRAV13-2A0A0B4J235 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TRAV13-2A0A0B4J235 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
TRAV13-2A0A0B4J235 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC12.48□□□□□ -0.41
TRAV13-2A0A0B4J235 SLC25A6P5-201ENST00000435663 894 ntBASIC12.48□□□□□ -0.41
TRAV13-2A0A0B4J235 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC12.48□□□□□ -0.41
TRAV13-2A0A0B4J235 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC12.48□□□□□ -0.41
TRAV13-2A0A0B4J235 AC126763.1-201ENST00000552015 2118 ntBASIC12.48□□□□□ -0.41
TRAV13-2A0A0B4J235 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC12.48□□□□□ -0.41
TRAV13-2A0A0B4J235 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TRAV13-2A0A0B4J235 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC12.48□□□□□ -0.41
TRAV13-2A0A0B4J235 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC12.48□□□□□ -0.41
TRAV13-2A0A0B4J235 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TRAV13-2A0A0B4J235 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TRAV13-2A0A0B4J235 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TRAV13-2A0A0B4J235 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TRAV13-2A0A0B4J235 AC063926.3-201ENST00000624734 5658 ntBASIC12.48□□□□□ -0.41
TRAV13-2A0A0B4J235 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TRAV13-2A0A0B4J235 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TRAV13-2A0A0B4J235 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TRAV13-2A0A0B4J235 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
TRAV13-2A0A0B4J235 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
TRAV13-2A0A0B4J235 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TRAV13-2A0A0B4J235 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC12.48□□□□□ -0.41
TRAV13-2A0A0B4J235 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TRAV13-2A0A0B4J235 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC12.48□□□□□ -0.41
TRAV13-2A0A0B4J235 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TRAV13-2A0A0B4J235 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TRAV13-2A0A0B4J235 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TRAV13-2A0A0B4J235 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
TRAV13-2A0A0B4J235 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
TRAV13-2A0A0B4J235 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
TRAV13-2A0A0B4J235 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
TRAV13-2A0A0B4J235 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
TRAV13-2A0A0B4J235 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
TRAV13-2A0A0B4J235 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
TRAV13-2A0A0B4J235 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TRAV13-2A0A0B4J235 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC12.47□□□□□ -0.41
TRAV13-2A0A0B4J235 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TRAV13-2A0A0B4J235 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
TRAV13-2A0A0B4J235 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TRAV13-2A0A0B4J235 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
TRAV13-2A0A0B4J235 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TRAV13-2A0A0B4J235 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC12.47□□□□□ -0.41
TRAV13-2A0A0B4J235 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
TRAV13-2A0A0B4J235 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
TRAV13-2A0A0B4J235 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC12.47□□□□□ -0.41
TRAV13-2A0A0B4J235 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
TRAV13-2A0A0B4J235 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
TRAV13-2A0A0B4J235 RPP21-222ENST00000433076 577 ntTSL 2 BASIC12.47□□□□□ -0.41
TRAV13-2A0A0B4J235 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC12.47□□□□□ -0.41
TRAV13-2A0A0B4J235 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC12.47□□□□□ -0.41
TRAV13-2A0A0B4J235 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC12.47□□□□□ -0.41
TRAV13-2A0A0B4J235 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TRAV13-2A0A0B4J235 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
TRAV13-2A0A0B4J235 AC012414.1-201ENST00000556676 535 ntBASIC12.47□□□□□ -0.41
TRAV13-2A0A0B4J235 TPRG1LP1-201ENST00000598702 760 ntBASIC12.47□□□□□ -0.41
TRAV13-2A0A0B4J235 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC12.47□□□□□ -0.41
TRAV13-2A0A0B4J235 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
TRAV13-2A0A0B4J235 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TRAV13-2A0A0B4J235 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TRAV13-2A0A0B4J235 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
TRAV13-2A0A0B4J235 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
TRAV13-2A0A0B4J235 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TRAV13-2A0A0B4J235 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
TRAV13-2A0A0B4J235 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC12.47□□□□□ -0.41
TRAV13-2A0A0B4J235 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TRAV13-2A0A0B4J235 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
TRAV13-2A0A0B4J235 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC12.47□□□□□ -0.41
TRAV13-2A0A0B4J235 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
TRAV13-2A0A0B4J235 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
TRAV13-2A0A0B4J235 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TRAV13-2A0A0B4J235 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TRAV13-2A0A0B4J235 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC12.47□□□□□ -0.41
TRAV13-2A0A0B4J235 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
TRAV13-2A0A0B4J235 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
TRAV13-2A0A0B4J235 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC12.46□□□□□ -0.41
TRAV13-2A0A0B4J235 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC12.46□□□□□ -0.41
TRAV13-2A0A0B4J235 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms