Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 CYCSP40-201ENST00000575927 294 ntBASIC5.05□□□□□ -1.6
RNF39Q9H2S5 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
RNF39Q9H2S5 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
RNF39Q9H2S5 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
RNF39Q9H2S5 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
RNF39Q9H2S5 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RNF39Q9H2S5 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RNF39Q9H2S5 RNU6ATAC5P-201ENST00000388104 126 ntBASIC5.04□□□□□ -1.6
RNF39Q9H2S5 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC5.04□□□□□ -1.6
RNF39Q9H2S5 AC104333.2-201ENST00000422630 192 ntBASIC5.04□□□□□ -1.6
RNF39Q9H2S5 MIR4284-201ENST00000578924 81 ntBASIC5.04□□□□□ -1.6
RNF39Q9H2S5 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
RNF39Q9H2S5 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RNF39Q9H2S5 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RNF39Q9H2S5 SCARNA10-201ENST00000459255 330 ntBASIC5.03□□□□□ -1.6
RNF39Q9H2S5 Y_RNA.697-201ENST00000516776 113 ntBASIC5.03□□□□□ -1.6
RNF39Q9H2S5 AC244505.7-201ENST00000599675 272 ntBASIC5.03□□□□□ -1.6
RNF39Q9H2S5 AC007318.2-201ENST00000620999 243 ntBASIC5.03□□□□□ -1.6
RNF39Q9H2S5 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC5.03□□□□□ -1.6
RNF39Q9H2S5 AC073869.9-201ENST00000641610 120 ntBASIC5.03□□□□□ -1.6
RNF39Q9H2S5 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RNF39Q9H2S5 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.02□□□□□ -1.61
RNF39Q9H2S5 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
RNF39Q9H2S5 AC016717.2-201ENST00000609089 5141 ntBASIC5.02□□□□□ -1.61
RNF39Q9H2S5 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
RNF39Q9H2S5 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
RNF39Q9H2S5 Y_RNA.224-201ENST00000364308 111 ntBASIC5.02□□□□□ -1.61
RNF39Q9H2S5 AL034345.1-201ENST00000407768 123 ntBASIC5.02□□□□□ -1.61
RNF39Q9H2S5 RNU6ATAC37P-201ENST00000408328 131 ntBASIC5.02□□□□□ -1.61
RNF39Q9H2S5 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RNF39Q9H2S5 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
RNF39Q9H2S5 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RNF39Q9H2S5 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RNF39Q9H2S5 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.02□□□□□ -1.61
RNF39Q9H2S5 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
RNF39Q9H2S5 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC5.02□□□□□ -1.61
RNF39Q9H2S5 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
RNF39Q9H2S5 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.01□□□□□ -1.61
RNF39Q9H2S5 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
RNF39Q9H2S5 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
RNF39Q9H2S5 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
RNF39Q9H2S5 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RNF39Q9H2S5 RNU6ATAC42P-201ENST00000408637 95 ntBASIC5.01□□□□□ -1.61
RNF39Q9H2S5 AL606490.4-201ENST00000423117 127 ntBASIC5.01□□□□□ -1.61
RNF39Q9H2S5 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RNF39Q9H2S5 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC5.01□□□□□ -1.61
RNF39Q9H2S5 MUC2-202ENST00000613187 4845 ntBASIC5.01□□□□□ -1.61
RNF39Q9H2S5 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.01□□□□□ -1.61
RNF39Q9H2S5 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC5.01□□□□□ -1.61
RNF39Q9H2S5 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5□□□□□ -1.61
RNF39Q9H2S5 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5□□□□□ -1.61
RNF39Q9H2S5 AL136164.3-201ENST00000624429 3978 ntBASIC5□□□□□ -1.61
RNF39Q9H2S5 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RNF39Q9H2S5 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
RNF39Q9H2S5 AC104623.2-202ENST00000623477 4002 ntBASIC5□□□□□ -1.61
RNF39Q9H2S5 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RNF39Q9H2S5 PWAR6-201ENST00000552334 4618 ntBASIC5□□□□□ -1.61
RNF39Q9H2S5 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RNF39Q9H2S5 SNORD114-6-201ENST00000364393 72 ntBASIC5□□□□□ -1.61
RNF39Q9H2S5 RNU6-1083P-201ENST00000384022 107 ntBASIC5□□□□□ -1.61
RNF39Q9H2S5 AL162591.2-201ENST00000449634 317 ntBASIC5□□□□□ -1.61
RNF39Q9H2S5 RNA5SP249-201ENST00000516127 99 ntBASIC5□□□□□ -1.61
RNF39Q9H2S5 SNORA31.10-201ENST00000516482 106 ntBASIC5□□□□□ -1.61
RNF39Q9H2S5 CPHL1P-201ENST00000461341 3407 ntBASIC5□□□□□ -1.61
RNF39Q9H2S5 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC4.99□□□□□ -1.61
RNF39Q9H2S5 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.99□□□□□ -1.61
RNF39Q9H2S5 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
RNF39Q9H2S5 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
RNF39Q9H2S5 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
RNF39Q9H2S5 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
RNF39Q9H2S5 SNORA11.4-201ENST00000408823 129 ntBASIC4.99□□□□□ -1.61
RNF39Q9H2S5 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
RNF39Q9H2S5 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
RNF39Q9H2S5 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC4.99□□□□□ -1.61
RNF39Q9H2S5 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
RNF39Q9H2S5 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
RNF39Q9H2S5 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
RNF39Q9H2S5 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
RNF39Q9H2S5 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
RNF39Q9H2S5 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RNF39Q9H2S5 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
RNF39Q9H2S5 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
RNF39Q9H2S5 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RNF39Q9H2S5 RNU6-645P-201ENST00000364649 106 ntBASIC4.98□□□□□ -1.61
RNF39Q9H2S5 SNORA71.2-201ENST00000364941 134 ntBASIC4.98□□□□□ -1.61
RNF39Q9H2S5 RNU6-935P-201ENST00000410371 100 ntBASIC4.98□□□□□ -1.61
RNF39Q9H2S5 CRYBB2P1-203ENST00000415709 538 ntBASIC4.98□□□□□ -1.61
RNF39Q9H2S5 CKS1BP6-201ENST00000424932 240 ntBASIC4.98□□□□□ -1.61
RNF39Q9H2S5 MIR4660-201ENST00000583549 74 ntBASIC4.98□□□□□ -1.61
RNF39Q9H2S5 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.98□□□□□ -1.61
RNF39Q9H2S5 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
RNF39Q9H2S5 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
RNF39Q9H2S5 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC4.97□□□□□ -1.61
RNF39Q9H2S5 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.97□□□□□ -1.61
RNF39Q9H2S5 RNU1-23P-201ENST00000363361 144 ntBASIC4.97□□□□□ -1.61
RNF39Q9H2S5 RNA5SP187-201ENST00000384400 119 ntBASIC4.97□□□□□ -1.61
RNF39Q9H2S5 RNU6-950P-201ENST00000384651 107 ntBASIC4.97□□□□□ -1.61
RNF39Q9H2S5 MIR451A-201ENST00000385059 72 ntBASIC4.97□□□□□ -1.61
RNF39Q9H2S5 HMGN2P35-201ENST00000412164 270 ntBASIC4.97□□□□□ -1.61
RNF39Q9H2S5 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 130.2 ms