Protein–RNA interactions for Protein: Q8N9I9

DTX3, Probable E3 ubiquitin-protein ligase DTX3, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DTX3Q8N9I9 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
DTX3Q8N9I9 SNORA38.1-201ENST00000364172 131 ntBASIC2.81□□□□□ -1.96
DTX3Q8N9I9 RNU6-728P-201ENST00000365375 104 ntBASIC2.81□□□□□ -1.96
DTX3Q8N9I9 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
DTX3Q8N9I9 RNU6-643P-201ENST00000384018 107 ntBASIC2.81□□□□□ -1.96
DTX3Q8N9I9 Y_RNA.586-201ENST00000391146 98 ntBASIC2.81□□□□□ -1.96
DTX3Q8N9I9 MIR513C-201ENST00000401352 84 ntBASIC2.81□□□□□ -1.96
DTX3Q8N9I9 RNU2-32P-201ENST00000411193 191 ntBASIC2.81□□□□□ -1.96
DTX3Q8N9I9 AL135786.1-201ENST00000415892 214 ntBASIC2.81□□□□□ -1.96
DTX3Q8N9I9 AC010154.1-201ENST00000425857 269 ntBASIC2.81□□□□□ -1.96
DTX3Q8N9I9 HMGN2P18-201ENST00000450680 270 ntBASIC2.81□□□□□ -1.96
DTX3Q8N9I9 UQCRHP3-201ENST00000451503 251 ntBASIC2.81□□□□□ -1.96
DTX3Q8N9I9 RPS29P12-201ENST00000460178 152 ntBASIC2.81□□□□□ -1.96
DTX3Q8N9I9 RPL23AP54-201ENST00000495129 419 ntBASIC2.81□□□□□ -1.96
DTX3Q8N9I9 RNA5SP272-201ENST00000516095 111 ntBASIC2.81□□□□□ -1.96
DTX3Q8N9I9 RNU6-62P-201ENST00000516526 102 ntBASIC2.81□□□□□ -1.96
DTX3Q8N9I9 SNORA70.24-201ENST00000517233 118 ntBASIC2.81□□□□□ -1.96
DTX3Q8N9I9 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.81□□□□□ -1.96
DTX3Q8N9I9 AC006435.5-201ENST00000624486 112 ntBASIC2.81□□□□□ -1.96
DTX3Q8N9I9 MIR3658-201ENST00000636291 56 ntBASIC2.81□□□□□ -1.96
DTX3Q8N9I9 U6.105-201ENST00000637379 88 ntBASIC2.81□□□□□ -1.96
DTX3Q8N9I9 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
DTX3Q8N9I9 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
DTX3Q8N9I9 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
DTX3Q8N9I9 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
DTX3Q8N9I9 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.81□□□□□ -1.96
DTX3Q8N9I9 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
DTX3Q8N9I9 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
DTX3Q8N9I9 RNU6-199P-201ENST00000362954 107 ntBASIC2.8□□□□□ -1.96
DTX3Q8N9I9 SNORA68.1-201ENST00000364537 132 ntBASIC2.8□□□□□ -1.96
DTX3Q8N9I9 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.8□□□□□ -1.96
DTX3Q8N9I9 RNU2-51P-201ENST00000410708 197 ntBASIC2.8□□□□□ -1.96
DTX3Q8N9I9 HMGN2P35-201ENST00000412164 270 ntBASIC2.8□□□□□ -1.96
DTX3Q8N9I9 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.8□□□□□ -1.96
DTX3Q8N9I9 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.8□□□□□ -1.96
DTX3Q8N9I9 CYP2C59P-201ENST00000457790 269 ntBASIC2.8□□□□□ -1.96
DTX3Q8N9I9 SNORA25.12-201ENST00000516202 82 ntBASIC2.8□□□□□ -1.96
DTX3Q8N9I9 RNU2-34P-201ENST00000516534 121 ntBASIC2.8□□□□□ -1.96
DTX3Q8N9I9 RNU6-63P-201ENST00000516690 95 ntBASIC2.8□□□□□ -1.96
DTX3Q8N9I9 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC2.8□□□□□ -1.96
DTX3Q8N9I9 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.8□□□□□ -1.96
DTX3Q8N9I9 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC2.8□□□□□ -1.96
DTX3Q8N9I9 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.8□□□□□ -1.96
DTX3Q8N9I9 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.8□□□□□ -1.96
DTX3Q8N9I9 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
DTX3Q8N9I9 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
DTX3Q8N9I9 AC080128.1-201ENST00000474389 1917 ntBASIC2.8□□□□□ -1.96
DTX3Q8N9I9 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.79□□□□□ -1.96
DTX3Q8N9I9 RNU4-13P-201ENST00000364019 141 ntBASIC2.79□□□□□ -1.96
DTX3Q8N9I9 RNU6-743P-201ENST00000364151 106 ntBASIC2.79□□□□□ -1.96
DTX3Q8N9I9 RNU1-33P-201ENST00000364249 162 ntBASIC2.79□□□□□ -1.96
DTX3Q8N9I9 RNA5SP267-201ENST00000364893 126 ntBASIC2.79□□□□□ -1.96
DTX3Q8N9I9 RNU6-1240P-201ENST00000365155 104 ntBASIC2.79□□□□□ -1.96
DTX3Q8N9I9 RNU6-22P-201ENST00000384355 107 ntBASIC2.79□□□□□ -1.96
DTX3Q8N9I9 MIR181A2-201ENST00000384863 110 ntBASIC2.79□□□□□ -1.96
DTX3Q8N9I9 RPL30P13-201ENST00000418873 348 ntBASIC2.79□□□□□ -1.96
DTX3Q8N9I9 AL161788.1-201ENST00000441805 169 ntBASIC2.79□□□□□ -1.96
DTX3Q8N9I9 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC2.79□□□□□ -1.96
DTX3Q8N9I9 RNU6-437P-201ENST00000459408 95 ntBASIC2.79□□□□□ -1.96
DTX3Q8N9I9 AC080013.2-201ENST00000460866 323 ntBASIC2.79□□□□□ -1.96
DTX3Q8N9I9 RPS27P22-201ENST00000478056 241 ntBASIC2.79□□□□□ -1.96
DTX3Q8N9I9 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.79□□□□□ -1.96
DTX3Q8N9I9 RNU6-561P-201ENST00000516222 102 ntBASIC2.79□□□□□ -1.96
DTX3Q8N9I9 RNU6-56P-201ENST00000516986 93 ntBASIC2.79□□□□□ -1.96
DTX3Q8N9I9 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.79□□□□□ -1.96
DTX3Q8N9I9 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
DTX3Q8N9I9 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.79□□□□□ -1.96
DTX3Q8N9I9 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
DTX3Q8N9I9 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
DTX3Q8N9I9 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
DTX3Q8N9I9 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
DTX3Q8N9I9 AC108206.1-201ENST00000570186 4159 ntBASIC2.78□□□□□ -1.96
DTX3Q8N9I9 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
DTX3Q8N9I9 AC010332.2-201ENST00000613083 1904 ntBASIC2.78□□□□□ -1.96
DTX3Q8N9I9 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.78□□□□□ -1.96
DTX3Q8N9I9 RNU6-525P-201ENST00000363685 104 ntBASIC2.78□□□□□ -1.96
DTX3Q8N9I9 SNORA70.4-201ENST00000365509 134 ntBASIC2.78□□□□□ -1.96
DTX3Q8N9I9 MIR181B1-201ENST00000385240 110 ntBASIC2.78□□□□□ -1.96
DTX3Q8N9I9 SNORD37.2-201ENST00000391075 66 ntBASIC2.78□□□□□ -1.96
DTX3Q8N9I9 RNU6-257P-201ENST00000410238 98 ntBASIC2.78□□□□□ -1.96
DTX3Q8N9I9 AC016909.1-201ENST00000415916 166 ntBASIC2.78□□□□□ -1.96
DTX3Q8N9I9 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.78□□□□□ -1.96
DTX3Q8N9I9 ATP6V0E1P4-201ENST00000427294 242 ntBASIC2.78□□□□□ -1.96
DTX3Q8N9I9 AC023141.11-201ENST00000508864 202 ntBASIC2.78□□□□□ -1.96
DTX3Q8N9I9 RNU6-479P-201ENST00000516348 105 ntBASIC2.78□□□□□ -1.96
DTX3Q8N9I9 IGKV2-26-201ENST00000518305 343 ntBASIC2.78□□□□□ -1.96
DTX3Q8N9I9 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.78□□□□□ -1.96
DTX3Q8N9I9 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.78□□□□□ -1.96
DTX3Q8N9I9 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC2.78□□□□□ -1.96
DTX3Q8N9I9 AC090115.4-201ENST00000609970 188 ntBASIC2.78□□□□□ -1.96
DTX3Q8N9I9 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.78□□□□□ -1.96
DTX3Q8N9I9 AC100821.1-201ENST00000523153 2479 ntBASIC2.78□□□□□ -1.96
DTX3Q8N9I9 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
DTX3Q8N9I9 Y_RNA.333-201ENST00000365274 102 ntBASIC2.77□□□□□ -1.97
DTX3Q8N9I9 RNY3P5-201ENST00000384127 102 ntBASIC2.77□□□□□ -1.97
DTX3Q8N9I9 SNORA40-201ENST00000388090 126 ntBASIC2.77□□□□□ -1.97
DTX3Q8N9I9 SNORD17-201ENST00000390930 237 ntBASIC2.77□□□□□ -1.97
DTX3Q8N9I9 RNU4-47P-201ENST00000410876 114 ntBASIC2.77□□□□□ -1.97
DTX3Q8N9I9 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.77□□□□□ -1.97
DTX3Q8N9I9 AC010531.2-201ENST00000465012 153 ntBASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 129.3 ms