RNA–Protein interactions for RNA: ENST00000365155.1

RNU6-1240P-201, Transcript of RNA, U6 small nuclear 1240, pseudogene, humanhuman

BASIC

Gene RNU6-1240P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1240P-201ENST00000365155 AEBP2Q6ZN18 517 aaPredicted RBP13.22□□□□□ -0.29
RNU6-1240P-201ENST00000365155 CHIC1Q5VXU3 224 aa12.17□□□□□ -0.46
RNU6-1240P-201ENST00000365155 POTEDQ86YR6 584 aa11.71□□□□□ -0.53
RNU6-1240P-201ENST00000365155 SENP3Q9H4L4 574 aaPredicted RBP11.28□□□□□ -0.6
RNU6-1240P-201ENST00000365155 PHF23Q9BUL5 403 aaPredicted RBP11.06□□□□□ -0.64
RNU6-1240P-201ENST00000365155 FOXD1Q16676 465 aa10.72□□□□□ -0.69
RNU6-1240P-201ENST00000365155 MSH5O43196 834 aa10.27□□□□□ -0.77
RNU6-1240P-201ENST00000365155 PIAS4Q8N2W9 510 aaPredicted RBP9.75□□□□□ -0.85
RNU6-1240P-201ENST00000365155 CACNB1Q02641 598 aaPredicted RBP9.42□□□□□ -0.9
RNU6-1240P-201ENST00000365155 PPP6R1Q9UPN7 881 aa9.36□□□□□ -0.91
RNU6-1240P-201ENST00000365155 ADRA2BP18089 450 aa9.25□□□□□ -0.93
RNU6-1240P-201ENST00000365155 POTEHQ6S545 545 aa8.96□□□□□ -0.98
RNU6-1240P-201ENST00000365155 DMRT2Q9Y5R5 561 aa8.84□□□□□ -0.99
RNU6-1240P-201ENST00000365155 MAPK8IP2Q13387 824 aaPredicted RBP8.8□□□□□ -1
RNU6-1240P-201ENST00000365155 PLPPR3Q6T4P5 718 aa8.76□□□□□ -1.01
RNU6-1240P-201ENST00000365155 RNF39Q9H2S5 420 aa8.75□□□□□ -1.01
RNU6-1240P-201ENST00000365155 DCAF8L1A6NGE4 600 aa8.51□□□□□ -1.05
RNU6-1240P-201ENST00000365155 C1QBPQ07021 282 aaKnown RBP8.5□□□□□ -1.05
RNU6-1240P-201ENST00000365155 SCAF1Q9H7N4 1312 aaKnown RBP8.29□□□□□ -1.08
RNU6-1240P-201ENST00000365155 HOXD11P31277 338 aaPredicted RBP8.15□□□□□ -1.1
RNU6-1240P-201ENST00000365155 DNAJC5BQ9UF47 199 aa7.97□□□□□ -1.13
RNU6-1240P-201ENST00000365155 SP7Q8TDD2 431 aaPredicted RBP7.96□□□□□ -1.14
RNU6-1240P-201ENST00000365155 DSG3P32926 999 aa7.89□□□□□ -1.15
RNU6-1240P-201ENST00000365155 RNF216Q9NWF9 866 aaPredicted RBP7.81□□□□□ -1.16
RNU6-1240P-201ENST00000365155 PLSCR2Q9NRY7 297 aa7.77□□□□□ -1.17
RNU6-1240P-201ENST00000365155 CHRDL2Q6WN34 429 aa7.73□□□□□ -1.17
RNU6-1240P-201ENST00000365155 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.73□□□□□ -1.17
RNU6-1240P-201ENST00000365155 SPINK5Q9NQ38 1064 aaPredicted RBP7.73□□□□□ -1.17
RNU6-1240P-201ENST00000365155 CAPN15O75808 1086 aa7.68□□□□□ -1.18
RNU6-1240P-201ENST00000365155 CNKSR2Q8WXI2 1034 aa7.64□□□□□ -1.19
RNU6-1240P-201ENST00000365155 PPP4R3CPQ6ZMV5 832 aa7.61□□□□□ -1.19
RNU6-1240P-201ENST00000365155 U3KPZ7 1027 aaPredicted RBP7.54□□□□□ -1.2
RNU6-1240P-201ENST00000365155 ABCB7O75027 752 aa7.49□□□□□ -1.21
RNU6-1240P-201ENST00000365155 HAX1O00165 279 aa7.45□□□□□ -1.22
RNU6-1240P-201ENST00000365155 LHX8Q68G74 356 aa7.45□□□□□ -1.22
RNU6-1240P-201ENST00000365155 RBM42Q9BTD8 480 aaKnown RBP7.45□□□□□ -1.22
RNU6-1240P-201ENST00000365155 EVX2Q03828 476 aa7.41□□□□□ -1.22
RNU6-1240P-201ENST00000365155 PIP4P2Q8N4L2 257 aa7.38□□□□□ -1.23
RNU6-1240P-201ENST00000365155 TRHP20396 242 aaPredicted RBP7.35□□□□□ -1.23
RNU6-1240P-201ENST00000365155 ZNF219Q9P2Y4 722 aaPredicted RBP7.24□□□□□ -1.25
RNU6-1240P-201ENST00000365155 KCNA4P22459 653 aa7.18□□□□□ -1.26
RNU6-1240P-201ENST00000365155 FXR2P51116 673 aaKnown RBP eCLIP7.16□□□□□ -1.26
RNU6-1240P-201ENST00000365155 AKT1S1Q96B36 256 aa7.12□□□□□ -1.27
RNU6-1240P-201ENST00000365155 GABBR2O75899 941 aa7.1□□□□□ -1.27
RNU6-1240P-201ENST00000365155 REM2Q8IYK8 340 aaPredicted RBP7.1□□□□□ -1.27
RNU6-1240P-201ENST00000365155 POTEMA6NI47 508 aa7.08□□□□□ -1.28
RNU6-1240P-201ENST00000365155 NCBP3Q53F19 620 aaKnown RBP7.07□□□□□ -1.28
RNU6-1240P-201ENST00000365155 PITPNM1O00562 1244 aa7.06□□□□□ -1.28
RNU6-1240P-201ENST00000365155 APLP2Q06481 763 aa7.04□□□□□ -1.28
RNU6-1240P-201ENST00000365155 POTEGQ6S5H5 508 aa7.02□□□□□ -1.29
RNU6-1240P-201ENST00000365155 POTEIP0CG38 1075 aa7.01□□□□□ -1.29
RNU6-1240P-201ENST00000365155 NPM3O75607 178 aaKnown RBP7□□□□□ -1.29
RNU6-1240P-201ENST00000365155 C19orf67A6NJJ6 358 aa6.97□□□□□ -1.29
RNU6-1240P-201ENST00000365155 POLA2Q14181 598 aa6.95□□□□□ -1.3
RNU6-1240P-201ENST00000365155 SLC4A2P04920 1241 aa6.93□□□□□ -1.3
RNU6-1240P-201ENST00000365155 OTUD5Q96G74 571 aa6.89□□□□□ -1.31
RNU6-1240P-201ENST00000365155 PCDH10Q9P2E7 1040 aa6.89□□□□□ -1.31
RNU6-1240P-201ENST00000365155 PRKAR2AP13861 404 aaKnown RBP6.84□□□□□ -1.31
RNU6-1240P-201ENST00000365155 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.83□□□□□ -1.32
RNU6-1240P-201ENST00000365155 HNRNPUL2Q1KMD3 747 aaKnown RBP6.83□□□□□ -1.32
RNU6-1240P-201ENST00000365155 SLC4A1APQ9BWU0 796 aaKnown RBP6.83□□□□□ -1.32
RNU6-1240P-201ENST00000365155 OSCARQ8IYS5 282 aa6.8□□□□□ -1.32
RNU6-1240P-201ENST00000365155 SAMD1Q6SPF0 538 aaPredicted RBP6.79□□□□□ -1.32
RNU6-1240P-201ENST00000365155 POTEB2H3BUK9 544 aa6.78□□□□□ -1.32
RNU6-1240P-201ENST00000365155 LCE2DQ5TA82 110 aaPredicted RBP6.75□□□□□ -1.33
RNU6-1240P-201ENST00000365155 EHMT2Q96KQ7 1210 aa6.7□□□□□ -1.34
RNU6-1240P-201ENST00000365155 DCBLD2Q96PD2 775 aa6.66□□□□□ -1.34
RNU6-1240P-201ENST00000365155 CSRNP3Q8WYN3 585 aa6.64□□□□□ -1.35
RNU6-1240P-201ENST00000365155 ZBTB22O15209 634 aa6.62□□□□□ -1.35
RNU6-1240P-201ENST00000365155 CHADLQ6NUI6 762 aa6.62□□□□□ -1.35
RNU6-1240P-201ENST00000365155 ZBTB12Q9Y330 459 aaPredicted RBP6.62□□□□□ -1.35
RNU6-1240P-201ENST00000365155 CLEC11AQ9Y240 323 aa6.58□□□□□ -1.36
RNU6-1240P-201ENST00000365155 FAM163AQ96GL9 167 aaPredicted RBP6.57□□□□□ -1.36
RNU6-1240P-201ENST00000365155 FOXD4L1Q9NU39 408 aa6.57□□□□□ -1.36
RNU6-1240P-201ENST00000365155 CD44P16070 742 aaKnown RBP6.56□□□□□ -1.36
RNU6-1240P-201ENST00000365155 CDAN1Q8IWY9 1227 aa6.55□□□□□ -1.36
RNU6-1240P-201ENST00000365155 POTEJP0CG39 1038 aa6.53□□□□□ -1.36
RNU6-1240P-201ENST00000365155 CLCN6P51797 869 aa6.52□□□□□ -1.37
RNU6-1240P-201ENST00000365155 MMRN1Q13201 1228 aa6.5□□□□□ -1.37
RNU6-1240P-201ENST00000365155 SPDYE1Q8NFV5 336 aaPredicted RBP6.5□□□□□ -1.37
RNU6-1240P-201ENST00000365155 GALR2O43603 387 aaPredicted RBP6.46□□□□□ -1.38
RNU6-1240P-201ENST00000365155 PELP1Q8IZL8 1130 aaKnown RBP6.45□□□□□ -1.38
RNU6-1240P-201ENST00000365155 ATF5Q9Y2D1 282 aaPredicted RBP6.45□□□□□ -1.38
RNU6-1240P-201ENST00000365155 MYCNP04198 464 aaPredicted RBP6.44□□□□□ -1.38
RNU6-1240P-201ENST00000365155 ZNF579Q8NAF0 562 aaKnown RBP6.42□□□□□ -1.38
RNU6-1240P-201ENST00000365155 SPNS2Q8IVW8 549 aa6.41□□□□□ -1.38
RNU6-1240P-201ENST00000365155 SPDYE2BA6NHP3 402 aa6.4□□□□□ -1.38
RNU6-1240P-201ENST00000365155 SPDYE6P0CI01 402 aa6.4□□□□□ -1.38
RNU6-1240P-201ENST00000365155 SPDYE2Q495Y8 402 aa6.4□□□□□ -1.38
RNU6-1240P-201ENST00000365155 FARP1Q9Y4F1 1045 aaPredicted RBP6.37□□□□□ -1.39
RNU6-1240P-201ENST00000365155 ATXN8OSP0DMR3 200 aa6.34□□□□□ -1.39
RNU6-1240P-201ENST00000365155 MAMSTRQ6ZN01 415 aa6.34□□□□□ -1.39
RNU6-1240P-201ENST00000365155 METRNQ9UJH8 293 aa6.34□□□□□ -1.39
RNU6-1240P-201ENST00000365155 ZRANB1Q9UGI0 708 aa6.32□□□□□ -1.4
RNU6-1240P-201ENST00000365155 PRR29P0C7W0 189 aa6.31□□□□□ -1.4
RNU6-1240P-201ENST00000365155 SCUBE2Q9NQ36 999 aa6.28□□□□□ -1.4
RNU6-1240P-201ENST00000365155 SSUH2Q9Y2M2 353 aa6.26□□□□□ -1.41
RNU6-1240P-201ENST00000365155 C7P10643 843 aa6.23□□□□□ -1.41
RNU6-1240P-201ENST00000365155 SLC39A7Q92504 469 aa6.23□□□□□ -1.41
RNU6-1240P-201ENST00000365155 ASTLQ6HA08 431 aaPredicted RBP6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms