RNA–Protein interactions for RNA: ENST00000639507.1

AP000550.4-201, humanhuman

TSL 3 BASIC

Gene AP000550.4, Length 358 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000550.4-201ENST00000639507 AEBP2Q6ZN18 517 aaPredicted RBP13.47□□□□□ -0.25
AP000550.4-201ENST00000639507 CHIC1Q5VXU3 224 aa12.79□□□□□ -0.36
AP000550.4-201ENST00000639507 SENP3Q9H4L4 574 aaPredicted RBP11.52□□□□□ -0.57
AP000550.4-201ENST00000639507 PHF23Q9BUL5 403 aaPredicted RBP11.34□□□□□ -0.59
AP000550.4-201ENST00000639507 FOXD1Q16676 465 aa10.72□□□□□ -0.69
AP000550.4-201ENST00000639507 PLPPR3Q6T4P5 718 aa10.2□□□□□ -0.78
AP000550.4-201ENST00000639507 MSH5O43196 834 aa10.08□□□□□ -0.8
AP000550.4-201ENST00000639507 PPP6R1Q9UPN7 881 aa9.99□□□□□ -0.81
AP000550.4-201ENST00000639507 PIAS4Q8N2W9 510 aaPredicted RBP9.97□□□□□ -0.81
AP000550.4-201ENST00000639507 ADRA2BP18089 450 aa9.92□□□□□ -0.82
AP000550.4-201ENST00000639507 POTEDQ86YR6 584 aa9.85□□□□□ -0.83
AP000550.4-201ENST00000639507 SCAF1Q9H7N4 1312 aaKnown RBP9.14□□□□□ -0.95
AP000550.4-201ENST00000639507 DMRT2Q9Y5R5 561 aa9.14□□□□□ -0.95
AP000550.4-201ENST00000639507 MAPK8IP2Q13387 824 aaPredicted RBP9.11□□□□□ -0.95
AP000550.4-201ENST00000639507 PPP4R3CPQ6ZMV5 832 aa8.91□□□□□ -0.98
AP000550.4-201ENST00000639507 HOXD11P31277 338 aaPredicted RBP8.83□□□□□ -1
AP000550.4-201ENST00000639507 CNKSR2Q8WXI2 1034 aa8.79□□□□□ -1
AP000550.4-201ENST00000639507 RNF216Q9NWF9 866 aaPredicted RBP8.73□□□□□ -1.01
AP000550.4-201ENST00000639507 DNAJC5BQ9UF47 199 aa8.62□□□□□ -1.03
AP000550.4-201ENST00000639507 DCAF8L1A6NGE4 600 aa8.61□□□□□ -1.03
AP000550.4-201ENST00000639507 RNF39Q9H2S5 420 aa8.6□□□□□ -1.03
AP000550.4-201ENST00000639507 CACNB1Q02641 598 aaPredicted RBP8.59□□□□□ -1.03
AP000550.4-201ENST00000639507 NCBP3Q53F19 620 aaKnown RBP8.58□□□□□ -1.04
AP000550.4-201ENST00000639507 C1QBPQ07021 282 aaKnown RBP8.48□□□□□ -1.05
AP000550.4-201ENST00000639507 NPM3O75607 178 aaKnown RBP8.44□□□□□ -1.06
AP000550.4-201ENST00000639507 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.3□□□□□ -1.08
AP000550.4-201ENST00000639507 KCNA4P22459 653 aa8.22□□□□□ -1.09
AP000550.4-201ENST00000639507 U3KPZ7 1027 aaPredicted RBP8.17□□□□□ -1.1
AP000550.4-201ENST00000639507 SLC4A2P04920 1241 aa8.08□□□□□ -1.12
AP000550.4-201ENST00000639507 DSG3P32926 999 aa8.02□□□□□ -1.13
AP000550.4-201ENST00000639507 SPINK5Q9NQ38 1064 aaPredicted RBP8.02□□□□□ -1.13
AP000550.4-201ENST00000639507 CAPN15O75808 1086 aa7.98□□□□□ -1.13
AP000550.4-201ENST00000639507 APLP2Q06481 763 aa7.97□□□□□ -1.13
AP000550.4-201ENST00000639507 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.96□□□□□ -1.14
AP000550.4-201ENST00000639507 HNRNPUL2Q1KMD3 747 aaKnown RBP7.96□□□□□ -1.14
AP000550.4-201ENST00000639507 ZNF219Q9P2Y4 722 aaPredicted RBP7.91□□□□□ -1.14
AP000550.4-201ENST00000639507 SAMD1Q6SPF0 538 aaPredicted RBP7.9□□□□□ -1.14
AP000550.4-201ENST00000639507 TRHP20396 242 aaPredicted RBP7.83□□□□□ -1.16
AP000550.4-201ENST00000639507 MYCNP04198 464 aaPredicted RBP7.82□□□□□ -1.16
AP000550.4-201ENST00000639507 ABCB7O75027 752 aa7.76□□□□□ -1.17
AP000550.4-201ENST00000639507 SLC4A1APQ9BWU0 796 aaKnown RBP7.75□□□□□ -1.17
AP000550.4-201ENST00000639507 FOXD4L1Q9NU39 408 aa7.71□□□□□ -1.18
AP000550.4-201ENST00000639507 POTEHQ6S545 545 aa7.7□□□□□ -1.18
AP000550.4-201ENST00000639507 RBM42Q9BTD8 480 aaKnown RBP7.67□□□□□ -1.18
AP000550.4-201ENST00000639507 POLA2Q14181 598 aa7.66□□□□□ -1.18
AP000550.4-201ENST00000639507 ATF5Q9Y2D1 282 aaPredicted RBP7.6□□□□□ -1.19
AP000550.4-201ENST00000639507 ZBTB22O15209 634 aa7.57□□□□□ -1.2
AP000550.4-201ENST00000639507 ZBTB12Q9Y330 459 aaPredicted RBP7.56□□□□□ -1.2
AP000550.4-201ENST00000639507 ATXN8OSP0DMR3 200 aa7.55□□□□□ -1.2
AP000550.4-201ENST00000639507 AKT1S1Q96B36 256 aa7.49□□□□□ -1.21
AP000550.4-201ENST00000639507 CHRDL2Q6WN34 429 aa7.48□□□□□ -1.21
AP000550.4-201ENST00000639507 OSCARQ8IYS5 282 aa7.4□□□□□ -1.22
AP000550.4-201ENST00000639507 REM2Q8IYK8 340 aaPredicted RBP7.39□□□□□ -1.23
AP000550.4-201ENST00000639507 SPDYE2BA6NHP3 402 aa7.32□□□□□ -1.24
AP000550.4-201ENST00000639507 SPDYE6P0CI01 402 aa7.32□□□□□ -1.24
AP000550.4-201ENST00000639507 SPDYE2Q495Y8 402 aa7.32□□□□□ -1.24
AP000550.4-201ENST00000639507 FBLN2P98095 1184 aa7.31□□□□□ -1.24
AP000550.4-201ENST00000639507 PIP4P2Q8N4L2 257 aa7.3□□□□□ -1.24
AP000550.4-201ENST00000639507 PITPNM1O00562 1244 aa7.29□□□□□ -1.24
AP000550.4-201ENST00000639507 FXR2P51116 673 aaKnown RBP eCLIP7.29□□□□□ -1.24
AP000550.4-201ENST00000639507 MKRN4PQ13434 485 aaPredicted RBP7.28□□□□□ -1.24
AP000550.4-201ENST00000639507 SSUH2Q9Y2M2 353 aa7.24□□□□□ -1.25
AP000550.4-201ENST00000639507 SP7Q8TDD2 431 aaPredicted RBP7.22□□□□□ -1.25
AP000550.4-201ENST00000639507 CSRNP3Q8WYN3 585 aa7.2□□□□□ -1.26
AP000550.4-201ENST00000639507 SPDYE1Q8NFV5 336 aaPredicted RBP7.18□□□□□ -1.26
AP000550.4-201ENST00000639507 ZNF692Q9BU19 519 aaPredicted RBP7.17□□□□□ -1.26
AP000550.4-201ENST00000639507 HAX1O00165 279 aa7.12□□□□□ -1.27
AP000550.4-201ENST00000639507 PRKAR2AP13861 404 aaKnown RBP7.09□□□□□ -1.27
AP000550.4-201ENST00000639507 CLEC11AQ9Y240 323 aa7.08□□□□□ -1.28
AP000550.4-201ENST00000639507 EVX2Q03828 476 aa7.06□□□□□ -1.28
AP000550.4-201ENST00000639507 PABPN1Q86U42 306 aaKnown RBP eCLIP7.06□□□□□ -1.28
AP000550.4-201ENST00000639507 C19orf67A6NJJ6 358 aa7.05□□□□□ -1.28
AP000550.4-201ENST00000639507 PRR29P0C7W0 189 aa7.01□□□□□ -1.29
AP000550.4-201ENST00000639507 EHMT2Q96KQ7 1210 aa6.97□□□□□ -1.29
AP000550.4-201ENST00000639507 CHADLQ6NUI6 762 aa6.96□□□□□ -1.3
AP000550.4-201ENST00000639507 GABBR2O75899 941 aa6.92□□□□□ -1.3
AP000550.4-201ENST00000639507 STAG3Q9UJ98 1225 aa6.92□□□□□ -1.3
AP000550.4-201ENST00000639507 FARP1Q9Y4F1 1045 aaPredicted RBP6.92□□□□□ -1.3
AP000550.4-201ENST00000639507 CLCN6P51797 869 aa6.91□□□□□ -1.3
AP000550.4-201ENST00000639507 SPDYE4A6NLX3 237 aa6.89□□□□□ -1.31
AP000550.4-201ENST00000639507 CREBZFQ9NS37 354 aa6.87□□□□□ -1.31
AP000550.4-201ENST00000639507 CD44P16070 742 aaKnown RBP6.86□□□□□ -1.31
AP000550.4-201ENST00000639507 PROM2Q8N271 834 aa6.83□□□□□ -1.32
AP000550.4-201ENST00000639507 ZNF579Q8NAF0 562 aaKnown RBP6.81□□□□□ -1.32
AP000550.4-201ENST00000639507 POTEIP0CG38 1075 aa6.78□□□□□ -1.32
AP000550.4-201ENST00000639507 MNX1P50219 401 aaPredicted RBP6.78□□□□□ -1.32
AP000550.4-201ENST00000639507 LHX8Q68G74 356 aa6.76□□□□□ -1.33
AP000550.4-201ENST00000639507 ZRANB1Q9UGI0 708 aa6.74□□□□□ -1.33
AP000550.4-201ENST00000639507 NPM1P06748 294 aaKnown RBP eCLIP6.73□□□□□ -1.33
AP000550.4-201ENST00000639507 PAK3O75914 559 aaPredicted RBP6.69□□□□□ -1.34
AP000550.4-201ENST00000639507 DCBLD2Q96PD2 775 aa6.69□□□□□ -1.34
AP000550.4-201ENST00000639507 GALR2O43603 387 aaPredicted RBP6.67□□□□□ -1.34
AP000550.4-201ENST00000639507 PHF12Q96QT6 1004 aa6.64□□□□□ -1.35
AP000550.4-201ENST00000639507 ASTLQ6HA08 431 aaPredicted RBP6.6□□□□□ -1.35
AP000550.4-201ENST00000639507 CCDC61Q9Y6R9 512 aa6.6□□□□□ -1.35
AP000550.4-201ENST00000639507 MS4A3Q96HJ5 214 aa6.57□□□□□ -1.36
AP000550.4-201ENST00000639507 PLEKHG5O94827 1062 aa6.56□□□□□ -1.36
AP000550.4-201ENST00000639507 PELP1Q8IZL8 1130 aaKnown RBP6.56□□□□□ -1.36
AP000550.4-201ENST00000639507 ATMINO43313 823 aaPredicted RBP6.55□□□□□ -1.36
AP000550.4-201ENST00000639507 MIER1Q8N108 512 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms