RNA–Protein interactions for RNA: ENST00000364019.1

RNU4-13P-201, Transcript of RNA, U4 small nuclear 13, pseudogene, humanhuman

BASIC

Gene RNU4-13P, Length 141 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-13P-201ENST00000364019 AEBP2Q6ZN18 517 aaPredicted RBP11.41□□□□□ -0.58
RNU4-13P-201ENST00000364019 CHIC1Q5VXU3 224 aa11.06□□□□□ -0.64
RNU4-13P-201ENST00000364019 PHF23Q9BUL5 403 aaPredicted RBP9.71□□□□□ -0.86
RNU4-13P-201ENST00000364019 SENP3Q9H4L4 574 aaPredicted RBP9.69□□□□□ -0.86
RNU4-13P-201ENST00000364019 POTEDQ86YR6 584 aa9.07□□□□□ -0.96
RNU4-13P-201ENST00000364019 FOXD1Q16676 465 aa8.99□□□□□ -0.97
RNU4-13P-201ENST00000364019 PLPPR3Q6T4P5 718 aa8.91□□□□□ -0.98
RNU4-13P-201ENST00000364019 PPP6R1Q9UPN7 881 aa8.58□□□□□ -1.04
RNU4-13P-201ENST00000364019 ADRA2BP18089 450 aa8.52□□□□□ -1.05
RNU4-13P-201ENST00000364019 PIAS4Q8N2W9 510 aaPredicted RBP8.4□□□□□ -1.06
RNU4-13P-201ENST00000364019 MSH5O43196 834 aa8.34□□□□□ -1.07
RNU4-13P-201ENST00000364019 PPP4R3CPQ6ZMV5 832 aa7.82□□□□□ -1.16
RNU4-13P-201ENST00000364019 SCAF1Q9H7N4 1312 aaKnown RBP7.81□□□□□ -1.16
RNU4-13P-201ENST00000364019 MAPK8IP2Q13387 824 aaPredicted RBP7.75□□□□□ -1.17
RNU4-13P-201ENST00000364019 DMRT2Q9Y5R5 561 aa7.74□□□□□ -1.17
RNU4-13P-201ENST00000364019 CNKSR2Q8WXI2 1034 aa7.65□□□□□ -1.18
RNU4-13P-201ENST00000364019 NCBP3Q53F19 620 aaKnown RBP7.58□□□□□ -1.2
RNU4-13P-201ENST00000364019 HOXD11P31277 338 aaPredicted RBP7.57□□□□□ -1.2
RNU4-13P-201ENST00000364019 RNF216Q9NWF9 866 aaPredicted RBP7.55□□□□□ -1.2
RNU4-13P-201ENST00000364019 KCNA4P22459 653 aa7.52□□□□□ -1.21
RNU4-13P-201ENST00000364019 NPM3O75607 178 aaKnown RBP7.5□□□□□ -1.21
RNU4-13P-201ENST00000364019 DNAJC5BQ9UF47 199 aa7.48□□□□□ -1.21
RNU4-13P-201ENST00000364019 CACNB1Q02641 598 aaPredicted RBP7.27□□□□□ -1.25
RNU4-13P-201ENST00000364019 DCAF8L1A6NGE4 600 aa7.22□□□□□ -1.25
RNU4-13P-201ENST00000364019 RNF39Q9H2S5 420 aa7.16□□□□□ -1.26
RNU4-13P-201ENST00000364019 SLC4A1APQ9BWU0 796 aaKnown RBP7.13□□□□□ -1.27
RNU4-13P-201ENST00000364019 SLC4A2P04920 1241 aa7.12□□□□□ -1.27
RNU4-13P-201ENST00000364019 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.08□□□□□ -1.28
RNU4-13P-201ENST00000364019 C1QBPQ07021 282 aaKnown RBP7.06□□□□□ -1.28
RNU4-13P-201ENST00000364019 U3KPZ7 1027 aaPredicted RBP7.03□□□□□ -1.28
RNU4-13P-201ENST00000364019 POTEHQ6S545 545 aa6.98□□□□□ -1.29
RNU4-13P-201ENST00000364019 FOXD4L1Q9NU39 408 aa6.97□□□□□ -1.29
RNU4-13P-201ENST00000364019 ZBTB22O15209 634 aa6.95□□□□□ -1.3
RNU4-13P-201ENST00000364019 MYCNP04198 464 aaPredicted RBP6.93□□□□□ -1.3
RNU4-13P-201ENST00000364019 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.91□□□□□ -1.3
RNU4-13P-201ENST00000364019 HNRNPUL2Q1KMD3 747 aaKnown RBP6.91□□□□□ -1.3
RNU4-13P-201ENST00000364019 SAMD1Q6SPF0 538 aaPredicted RBP6.88□□□□□ -1.31
RNU4-13P-201ENST00000364019 APLP2Q06481 763 aa6.85□□□□□ -1.31
RNU4-13P-201ENST00000364019 CSRNP3Q8WYN3 585 aa6.82□□□□□ -1.32
RNU4-13P-201ENST00000364019 SPINK5Q9NQ38 1064 aaPredicted RBP6.82□□□□□ -1.32
RNU4-13P-201ENST00000364019 ATXN8OSP0DMR3 200 aa6.8□□□□□ -1.32
RNU4-13P-201ENST00000364019 ZNF219Q9P2Y4 722 aaPredicted RBP6.77□□□□□ -1.33
RNU4-13P-201ENST00000364019 DSG3P32926 999 aa6.76□□□□□ -1.33
RNU4-13P-201ENST00000364019 CAPN15O75808 1086 aa6.75□□□□□ -1.33
RNU4-13P-201ENST00000364019 EHMT2Q96KQ7 1210 aa6.73□□□□□ -1.33
RNU4-13P-201ENST00000364019 ATF5Q9Y2D1 282 aaPredicted RBP6.73□□□□□ -1.33
RNU4-13P-201ENST00000364019 TRHP20396 242 aaPredicted RBP6.69□□□□□ -1.34
RNU4-13P-201ENST00000364019 ABCB7O75027 752 aa6.61□□□□□ -1.35
RNU4-13P-201ENST00000364019 POLA2Q14181 598 aa6.6□□□□□ -1.35
RNU4-13P-201ENST00000364019 ZBTB12Q9Y330 459 aaPredicted RBP6.54□□□□□ -1.36
RNU4-13P-201ENST00000364019 MKRN4PQ13434 485 aaPredicted RBP6.47□□□□□ -1.37
RNU4-13P-201ENST00000364019 RBM42Q9BTD8 480 aaKnown RBP6.43□□□□□ -1.38
RNU4-13P-201ENST00000364019 FBLN2P98095 1184 aa6.42□□□□□ -1.38
RNU4-13P-201ENST00000364019 OSCARQ8IYS5 282 aa6.39□□□□□ -1.39
RNU4-13P-201ENST00000364019 SPDYE2BA6NHP3 402 aa6.37□□□□□ -1.39
RNU4-13P-201ENST00000364019 SPDYE6P0CI01 402 aa6.37□□□□□ -1.39
RNU4-13P-201ENST00000364019 SPDYE2Q495Y8 402 aa6.37□□□□□ -1.39
RNU4-13P-201ENST00000364019 AKT1S1Q96B36 256 aa6.35□□□□□ -1.39
RNU4-13P-201ENST00000364019 SSUH2Q9Y2M2 353 aa6.34□□□□□ -1.39
RNU4-13P-201ENST00000364019 REM2Q8IYK8 340 aaPredicted RBP6.26□□□□□ -1.41
RNU4-13P-201ENST00000364019 PROM2Q8N271 834 aa6.25□□□□□ -1.41
RNU4-13P-201ENST00000364019 ZNF692Q9BU19 519 aaPredicted RBP6.25□□□□□ -1.41
RNU4-13P-201ENST00000364019 SPDYE4A6NLX3 237 aa6.22□□□□□ -1.41
RNU4-13P-201ENST00000364019 PLSCR2Q9NRY7 297 aa6.2□□□□□ -1.42
RNU4-13P-201ENST00000364019 PITPNM1O00562 1244 aa6.18□□□□□ -1.42
RNU4-13P-201ENST00000364019 CHRDL2Q6WN34 429 aa6.18□□□□□ -1.42
RNU4-13P-201ENST00000364019 PABPN1Q86U42 306 aaKnown RBP eCLIP6.18□□□□□ -1.42
RNU4-13P-201ENST00000364019 SPDYE1Q8NFV5 336 aaPredicted RBP6.17□□□□□ -1.42
RNU4-13P-201ENST00000364019 FXR2P51116 673 aaKnown RBP eCLIP6.14□□□□□ -1.43
RNU4-13P-201ENST00000364019 SP7Q8TDD2 431 aaPredicted RBP6.12□□□□□ -1.43
RNU4-13P-201ENST00000364019 FKBP8Q14318 412 aa6.1□□□□□ -1.43
RNU4-13P-201ENST00000364019 STAG3Q9UJ98 1225 aa6.1□□□□□ -1.43
RNU4-13P-201ENST00000364019 PIP4P2Q8N4L2 257 aa6.09□□□□□ -1.43
RNU4-13P-201ENST00000364019 CLEC11AQ9Y240 323 aa6.05□□□□□ -1.44
RNU4-13P-201ENST00000364019 PRR29P0C7W0 189 aa6.03□□□□□ -1.44
RNU4-13P-201ENST00000364019 CREBZFQ9NS37 354 aa6□□□□□ -1.45
RNU4-13P-201ENST00000364019 PRKAR2AP13861 404 aaKnown RBP5.99□□□□□ -1.45
RNU4-13P-201ENST00000364019 MNX1P50219 401 aaPredicted RBP5.97□□□□□ -1.45
RNU4-13P-201ENST00000364019 FBXO3Q9UK99 471 aa5.96□□□□□ -1.46
RNU4-13P-201ENST00000364019 CHADLQ6NUI6 762 aa5.95□□□□□ -1.46
RNU4-13P-201ENST00000364019 FARP1Q9Y4F1 1045 aaPredicted RBP5.94□□□□□ -1.46
RNU4-13P-201ENST00000364019 C19orf67A6NJJ6 358 aa5.93□□□□□ -1.46
RNU4-13P-201ENST00000364019 VASPP50552 380 aaPredicted RBP5.88□□□□□ -1.47
RNU4-13P-201ENST00000364019 NPM1P06748 294 aaKnown RBP eCLIP5.86□□□□□ -1.47
RNU4-13P-201ENST00000364019 HAX1O00165 279 aa5.85□□□□□ -1.47
RNU4-13P-201ENST00000364019 EVX2Q03828 476 aa5.85□□□□□ -1.47
RNU4-13P-201ENST00000364019 MIER1Q8N108 512 aa5.85□□□□□ -1.47
RNU4-13P-201ENST00000364019 PLEKHG5O94827 1062 aa5.84□□□□□ -1.47
RNU4-13P-201ENST00000364019 ZBTB47Q9UFB7 747 aaPredicted RBP5.84□□□□□ -1.47
RNU4-13P-201ENST00000364019 PLCD3Q8N3E9 789 aa5.83□□□□□ -1.48
RNU4-13P-201ENST00000364019 CD44P16070 742 aaKnown RBP5.82□□□□□ -1.48
RNU4-13P-201ENST00000364019 NUBP1P53384 320 aa5.82□□□□□ -1.48
RNU4-13P-201ENST00000364019 CLCN6P51797 869 aa5.81□□□□□ -1.48
RNU4-13P-201ENST00000364019 ZNF579Q8NAF0 562 aaKnown RBP5.81□□□□□ -1.48
RNU4-13P-201ENST00000364019 IFNLR1Q8IU57 520 aaPredicted RBP5.8□□□□□ -1.48
RNU4-13P-201ENST00000364019 RASEFQ8IZ41 740 aa5.78□□□□□ -1.48
RNU4-13P-201ENST00000364019 CCDC61Q9Y6R9 512 aa5.77□□□□□ -1.49
RNU4-13P-201ENST00000364019 PAK3O75914 559 aaPredicted RBP5.75□□□□□ -1.49
RNU4-13P-201ENST00000364019 ZRANB1Q9UGI0 708 aa5.75□□□□□ -1.49
RNU4-13P-201ENST00000364019 GABBR2O75899 941 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms