RNA–Protein interactions for RNA: ENST00000410238.1

RNU6-257P-201, Transcript of RNA, U6 small nuclear 257, pseudogene, humanhuman

BASIC

Gene RNU6-257P, Length 98 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-257P-201ENST00000410238 AEBP2Q6ZN18 517 aaPredicted RBP16.78■□□□□ 0.28
RNU6-257P-201ENST00000410238 CHIC1Q5VXU3 224 aa15.74■□□□□ 0.11
RNU6-257P-201ENST00000410238 SENP3Q9H4L4 574 aaPredicted RBP14.45□□□□□ -0.1
RNU6-257P-201ENST00000410238 PHF23Q9BUL5 403 aaPredicted RBP14.17□□□□□ -0.14
RNU6-257P-201ENST00000410238 FOXD1Q16676 465 aa13.49□□□□□ -0.25
RNU6-257P-201ENST00000410238 POTEDQ86YR6 584 aa13.34□□□□□ -0.27
RNU6-257P-201ENST00000410238 MSH5O43196 834 aa12.86□□□□□ -0.35
RNU6-257P-201ENST00000410238 PIAS4Q8N2W9 510 aaPredicted RBP12.53□□□□□ -0.4
RNU6-257P-201ENST00000410238 PPP6R1Q9UPN7 881 aa12.22□□□□□ -0.45
RNU6-257P-201ENST00000410238 PLPPR3Q6T4P5 718 aa12.19□□□□□ -0.46
RNU6-257P-201ENST00000410238 ADRA2BP18089 450 aa12.18□□□□□ -0.46
RNU6-257P-201ENST00000410238 CACNB1Q02641 598 aaPredicted RBP11.35□□□□□ -0.59
RNU6-257P-201ENST00000410238 DMRT2Q9Y5R5 561 aa11.35□□□□□ -0.59
RNU6-257P-201ENST00000410238 MAPK8IP2Q13387 824 aaPredicted RBP11.33□□□□□ -0.6
RNU6-257P-201ENST00000410238 SCAF1Q9H7N4 1312 aaKnown RBP11.2□□□□□ -0.62
RNU6-257P-201ENST00000410238 DCAF8L1A6NGE4 600 aa10.99□□□□□ -0.65
RNU6-257P-201ENST00000410238 RNF39Q9H2S5 420 aa10.9□□□□□ -0.66
RNU6-257P-201ENST00000410238 HOXD11P31277 338 aaPredicted RBP10.75□□□□□ -0.69
RNU6-257P-201ENST00000410238 C1QBPQ07021 282 aaKnown RBP10.73□□□□□ -0.69
RNU6-257P-201ENST00000410238 PPP4R3CPQ6ZMV5 832 aa10.61□□□□□ -0.71
RNU6-257P-201ENST00000410238 RNF216Q9NWF9 866 aaPredicted RBP10.55□□□□□ -0.72
RNU6-257P-201ENST00000410238 CNKSR2Q8WXI2 1034 aa10.53□□□□□ -0.72
RNU6-257P-201ENST00000410238 DNAJC5BQ9UF47 199 aa10.47□□□□□ -0.73
RNU6-257P-201ENST00000410238 POTEHQ6S545 545 aa10.37□□□□□ -0.75
RNU6-257P-201ENST00000410238 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.3□□□□□ -0.76
RNU6-257P-201ENST00000410238 NCBP3Q53F19 620 aaKnown RBP10.1□□□□□ -0.79
RNU6-257P-201ENST00000410238 CAPN15O75808 1086 aa10.03□□□□□ -0.8
RNU6-257P-201ENST00000410238 DSG3P32926 999 aa10.03□□□□□ -0.8
RNU6-257P-201ENST00000410238 SPINK5Q9NQ38 1064 aaPredicted RBP9.98□□□□□ -0.81
RNU6-257P-201ENST00000410238 U3KPZ7 1027 aaPredicted RBP9.97□□□□□ -0.81
RNU6-257P-201ENST00000410238 NPM3O75607 178 aaKnown RBP9.89□□□□□ -0.83
RNU6-257P-201ENST00000410238 ABCB7O75027 752 aa9.75□□□□□ -0.85
RNU6-257P-201ENST00000410238 TRHP20396 242 aaPredicted RBP9.75□□□□□ -0.85
RNU6-257P-201ENST00000410238 APLP2Q06481 763 aa9.71□□□□□ -0.86
RNU6-257P-201ENST00000410238 ZNF219Q9P2Y4 722 aaPredicted RBP9.71□□□□□ -0.86
RNU6-257P-201ENST00000410238 RBM42Q9BTD8 480 aaKnown RBP9.64□□□□□ -0.87
RNU6-257P-201ENST00000410238 CHRDL2Q6WN34 429 aa9.6□□□□□ -0.87
RNU6-257P-201ENST00000410238 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.57□□□□□ -0.88
RNU6-257P-201ENST00000410238 HNRNPUL2Q1KMD3 747 aaKnown RBP9.57□□□□□ -0.88
RNU6-257P-201ENST00000410238 SLC4A2P04920 1241 aa9.56□□□□□ -0.88
RNU6-257P-201ENST00000410238 SP7Q8TDD2 431 aaPredicted RBP9.5□□□□□ -0.89
RNU6-257P-201ENST00000410238 SAMD1Q6SPF0 538 aaPredicted RBP9.48□□□□□ -0.89
RNU6-257P-201ENST00000410238 POLA2Q14181 598 aa9.36□□□□□ -0.91
RNU6-257P-201ENST00000410238 AKT1S1Q96B36 256 aa9.29□□□□□ -0.92
RNU6-257P-201ENST00000410238 KCNA4P22459 653 aa9.27□□□□□ -0.93
RNU6-257P-201ENST00000410238 HAX1O00165 279 aa9.25□□□□□ -0.93
RNU6-257P-201ENST00000410238 PIP4P2Q8N4L2 257 aa9.25□□□□□ -0.93
RNU6-257P-201ENST00000410238 MYCNP04198 464 aaPredicted RBP9.19□□□□□ -0.94
RNU6-257P-201ENST00000410238 REM2Q8IYK8 340 aaPredicted RBP9.19□□□□□ -0.94
RNU6-257P-201ENST00000410238 ZBTB12Q9Y330 459 aaPredicted RBP9.15□□□□□ -0.94
RNU6-257P-201ENST00000410238 FXR2P51116 673 aaKnown RBP eCLIP9.11□□□□□ -0.95
RNU6-257P-201ENST00000410238 PITPNM1O00562 1244 aa9.1□□□□□ -0.95
RNU6-257P-201ENST00000410238 OSCARQ8IYS5 282 aa9.07□□□□□ -0.96
RNU6-257P-201ENST00000410238 EVX2Q03828 476 aa9.03□□□□□ -0.96
RNU6-257P-201ENST00000410238 ATF5Q9Y2D1 282 aaPredicted RBP8.98□□□□□ -0.97
RNU6-257P-201ENST00000410238 LHX8Q68G74 356 aa8.91□□□□□ -0.98
RNU6-257P-201ENST00000410238 PRKAR2AP13861 404 aaKnown RBP8.88□□□□□ -0.99
RNU6-257P-201ENST00000410238 C19orf67A6NJJ6 358 aa8.84□□□□□ -0.99
RNU6-257P-201ENST00000410238 GABBR2O75899 941 aa8.84□□□□□ -0.99
RNU6-257P-201ENST00000410238 FOXD4L1Q9NU39 408 aa8.83□□□□□ -1
RNU6-257P-201ENST00000410238 CLEC11AQ9Y240 323 aa8.82□□□□□ -1
RNU6-257P-201ENST00000410238 SPDYE2BA6NHP3 402 aa8.81□□□□□ -1
RNU6-257P-201ENST00000410238 SPDYE6P0CI01 402 aa8.81□□□□□ -1
RNU6-257P-201ENST00000410238 SPDYE2Q495Y8 402 aa8.81□□□□□ -1
RNU6-257P-201ENST00000410238 SPDYE1Q8NFV5 336 aaPredicted RBP8.79□□□□□ -1
RNU6-257P-201ENST00000410238 PLSCR2Q9NRY7 297 aa8.79□□□□□ -1
RNU6-257P-201ENST00000410238 FBLN2P98095 1184 aa8.73□□□□□ -1.01
RNU6-257P-201ENST00000410238 SLC4A1APQ9BWU0 796 aaKnown RBP8.69□□□□□ -1.02
RNU6-257P-201ENST00000410238 CHADLQ6NUI6 762 aa8.67□□□□□ -1.02
RNU6-257P-201ENST00000410238 ZNF692Q9BU19 519 aaPredicted RBP8.64□□□□□ -1.03
RNU6-257P-201ENST00000410238 POTEIP0CG38 1075 aa8.61□□□□□ -1.03
RNU6-257P-201ENST00000410238 SSUH2Q9Y2M2 353 aa8.61□□□□□ -1.03
RNU6-257P-201ENST00000410238 PRR29P0C7W0 189 aa8.6□□□□□ -1.03
RNU6-257P-201ENST00000410238 ATXN8OSP0DMR3 200 aa8.6□□□□□ -1.03
RNU6-257P-201ENST00000410238 CD44P16070 742 aaKnown RBP8.57□□□□□ -1.04
RNU6-257P-201ENST00000410238 CLCN6P51797 869 aa8.56□□□□□ -1.04
RNU6-257P-201ENST00000410238 DCBLD2Q96PD2 775 aa8.54□□□□□ -1.04
RNU6-257P-201ENST00000410238 MKRN4PQ13434 485 aaPredicted RBP8.53□□□□□ -1.04
RNU6-257P-201ENST00000410238 ZBTB22O15209 634 aa8.49□□□□□ -1.05
RNU6-257P-201ENST00000410238 FARP1Q9Y4F1 1045 aaPredicted RBP8.49□□□□□ -1.05
RNU6-257P-201ENST00000410238 PABPN1Q86U42 306 aaKnown RBP eCLIP8.48□□□□□ -1.05
RNU6-257P-201ENST00000410238 POTEMA6NI47 508 aa8.42□□□□□ -1.06
RNU6-257P-201ENST00000410238 OTUD5Q96G74 571 aa8.41□□□□□ -1.06
RNU6-257P-201ENST00000410238 ZNF579Q8NAF0 562 aaKnown RBP8.4□□□□□ -1.06
RNU6-257P-201ENST00000410238 POTEGQ6S5H5 508 aa8.38□□□□□ -1.07
RNU6-257P-201ENST00000410238 ZRANB1Q9UGI0 708 aa8.38□□□□□ -1.07
RNU6-257P-201ENST00000410238 POTEB2H3BUK9 544 aa8.32□□□□□ -1.08
RNU6-257P-201ENST00000410238 GALR2O43603 387 aaPredicted RBP8.32□□□□□ -1.08
RNU6-257P-201ENST00000410238 PCDH10Q9P2E7 1040 aa8.32□□□□□ -1.08
RNU6-257P-201ENST00000410238 PAK3O75914 559 aaPredicted RBP8.25□□□□□ -1.09
RNU6-257P-201ENST00000410238 CREBZFQ9NS37 354 aa8.22□□□□□ -1.09
RNU6-257P-201ENST00000410238 PHF12Q96QT6 1004 aa8.2□□□□□ -1.1
RNU6-257P-201ENST00000410238 PELP1Q8IZL8 1130 aaKnown RBP8.19□□□□□ -1.1
RNU6-257P-201ENST00000410238 STAG3Q9UJ98 1225 aa8.18□□□□□ -1.1
RNU6-257P-201ENST00000410238 METRNQ9UJH8 293 aa8.18□□□□□ -1.1
RNU6-257P-201ENST00000410238 MAMSTRQ6ZN01 415 aa8.17□□□□□ -1.1
RNU6-257P-201ENST00000410238 SLC39A7Q92504 469 aa8.15□□□□□ -1.1
RNU6-257P-201ENST00000410238 FAM163AQ96GL9 167 aaPredicted RBP8.15□□□□□ -1.1
RNU6-257P-201ENST00000410238 C7P10643 843 aa8.14□□□□□ -1.11
RNU6-257P-201ENST00000410238 ASTLQ6HA08 431 aaPredicted RBP8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms