Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.53□□□□□ -1.84
RSPO4Q2I0M5 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC3.53□□□□□ -1.84
RSPO4Q2I0M5 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
RSPO4Q2I0M5 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
RSPO4Q2I0M5 RNU4-15P-201ENST00000362613 141 ntBASIC3.53□□□□□ -1.84
RSPO4Q2I0M5 RNU6-1305P-201ENST00000364353 104 ntBASIC3.53□□□□□ -1.84
RSPO4Q2I0M5 RNA5SP306-201ENST00000411087 107 ntBASIC3.53□□□□□ -1.84
RSPO4Q2I0M5 AL353705.1-201ENST00000433468 480 ntBASIC3.53□□□□□ -1.84
RSPO4Q2I0M5 S100A11P1-201ENST00000477525 312 ntBASIC3.53□□□□□ -1.84
RSPO4Q2I0M5 OR9P1P-201ENST00000496431 281 ntBASIC3.53□□□□□ -1.84
RSPO4Q2I0M5 RNU6-237P-201ENST00000515985 71 ntBASIC3.53□□□□□ -1.84
RSPO4Q2I0M5 RNU6-1282P-201ENST00000516735 96 ntBASIC3.53□□□□□ -1.84
RSPO4Q2I0M5 ACA59.2-201ENST00000517061 156 ntBASIC3.53□□□□□ -1.84
RSPO4Q2I0M5 AC105137.2-201ENST00000569073 466 ntBASIC3.53□□□□□ -1.84
RSPO4Q2I0M5 AL137790.1-201ENST00000634283 177 ntBASIC3.53□□□□□ -1.84
RSPO4Q2I0M5 AL162726.3-218ENST00000636401 95 ntBASIC3.53□□□□□ -1.84
RSPO4Q2I0M5 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
RSPO4Q2I0M5 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
RSPO4Q2I0M5 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.53□□□□□ -1.85
RSPO4Q2I0M5 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.52□□□□□ -1.85
RSPO4Q2I0M5 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.52□□□□□ -1.85
RSPO4Q2I0M5 AC000123.3-201ENST00000624029 4975 ntBASIC3.52□□□□□ -1.85
RSPO4Q2I0M5 RNU4-13P-201ENST00000364019 141 ntBASIC3.52□□□□□ -1.85
RSPO4Q2I0M5 Y_RNA.203-201ENST00000364106 102 ntBASIC3.52□□□□□ -1.85
RSPO4Q2I0M5 MIR562-201ENST00000384894 95 ntBASIC3.52□□□□□ -1.85
RSPO4Q2I0M5 MIR548D2-201ENST00000384955 97 ntBASIC3.52□□□□□ -1.85
RSPO4Q2I0M5 MIR586-201ENST00000385035 97 ntBASIC3.52□□□□□ -1.85
RSPO4Q2I0M5 SNORD17-201ENST00000390930 237 ntBASIC3.52□□□□□ -1.85
RSPO4Q2I0M5 AL451046.2-201ENST00000403074 277 ntBASIC3.52□□□□□ -1.85
RSPO4Q2I0M5 AC245291.1-201ENST00000419501 328 ntBASIC3.52□□□□□ -1.85
RSPO4Q2I0M5 AC244098.2-201ENST00000422068 99 ntBASIC3.52□□□□□ -1.85
RSPO4Q2I0M5 HMGN2P10-201ENST00000448085 265 ntBASIC3.52□□□□□ -1.85
RSPO4Q2I0M5 RPL39P25-201ENST00000449384 154 ntBASIC3.52□□□□□ -1.85
RSPO4Q2I0M5 HMGB1P22-201ENST00000505315 124 ntBASIC3.52□□□□□ -1.85
RSPO4Q2I0M5 AL591424.2-201ENST00000617023 128 ntBASIC3.52□□□□□ -1.85
RSPO4Q2I0M5 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.52□□□□□ -1.85
RSPO4Q2I0M5 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.52□□□□□ -1.85
RSPO4Q2I0M5 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
RSPO4Q2I0M5 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
RSPO4Q2I0M5 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.52□□□□□ -1.85
RSPO4Q2I0M5 AL133412.1-201ENST00000380194 2992 ntBASIC3.52□□□□□ -1.85
RSPO4Q2I0M5 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
RSPO4Q2I0M5 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
RSPO4Q2I0M5 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
RSPO4Q2I0M5 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
RSPO4Q2I0M5 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.51□□□□□ -1.85
RSPO4Q2I0M5 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
RSPO4Q2I0M5 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC3.51□□□□□ -1.85
RSPO4Q2I0M5 RNA5SP511-201ENST00000410487 115 ntBASIC3.51□□□□□ -1.85
RSPO4Q2I0M5 Y_RNA.601-201ENST00000410500 113 ntBASIC3.51□□□□□ -1.85
RSPO4Q2I0M5 AC080013.2-201ENST00000460866 323 ntBASIC3.51□□□□□ -1.85
RSPO4Q2I0M5 RPS26P48-201ENST00000491713 339 ntBASIC3.51□□□□□ -1.85
RSPO4Q2I0M5 AC097462.1-201ENST00000514125 324 ntBASIC3.51□□□□□ -1.85
RSPO4Q2I0M5 SCARNA15-202ENST00000516881 127 ntBASIC3.51□□□□□ -1.85
RSPO4Q2I0M5 RN7SKP209-201ENST00000516888 304 ntBASIC3.51□□□□□ -1.85
RSPO4Q2I0M5 U7.3-201ENST00000616123 62 ntBASIC3.51□□□□□ -1.85
RSPO4Q2I0M5 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.51□□□□□ -1.85
RSPO4Q2I0M5 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
RSPO4Q2I0M5 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.5□□□□□ -1.85
RSPO4Q2I0M5 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC3.5□□□□□ -1.85
RSPO4Q2I0M5 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.5□□□□□ -1.85
RSPO4Q2I0M5 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
RSPO4Q2I0M5 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
RSPO4Q2I0M5 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.5□□□□□ -1.85
RSPO4Q2I0M5 MIR422A-201ENST00000362286 90 ntBASIC3.5□□□□□ -1.85
RSPO4Q2I0M5 SNORD74.4-201ENST00000364129 80 ntBASIC3.5□□□□□ -1.85
RSPO4Q2I0M5 Y_RNA.796-201ENST00000364268 102 ntBASIC3.5□□□□□ -1.85
RSPO4Q2I0M5 Y_RNA.799-201ENST00000364992 102 ntBASIC3.5□□□□□ -1.85
RSPO4Q2I0M5 RNU6-1197P-201ENST00000391183 107 ntBASIC3.5□□□□□ -1.85
RSPO4Q2I0M5 AC069285.2-201ENST00000440210 275 ntBASIC3.5□□□□□ -1.85
RSPO4Q2I0M5 AC145146.1-201ENST00000496370 254 ntBASIC3.5□□□□□ -1.85
RSPO4Q2I0M5 AC096725.1-201ENST00000514266 313 ntBASIC3.5□□□□□ -1.85
RSPO4Q2I0M5 RNU6-162P-201ENST00000516228 103 ntBASIC3.5□□□□□ -1.85
RSPO4Q2I0M5 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.5□□□□□ -1.85
RSPO4Q2I0M5 AC021739.1-201ENST00000559631 174 ntBASIC3.5□□□□□ -1.85
RSPO4Q2I0M5 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.5□□□□□ -1.85
RSPO4Q2I0M5 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
RSPO4Q2I0M5 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
RSPO4Q2I0M5 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
RSPO4Q2I0M5 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
RSPO4Q2I0M5 RNU6-486P-201ENST00000363116 107 ntBASIC3.49□□□□□ -1.85
RSPO4Q2I0M5 RNU6-1209P-201ENST00000363655 107 ntBASIC3.49□□□□□ -1.85
RSPO4Q2I0M5 MIR93-201ENST00000385024 80 ntBASIC3.49□□□□□ -1.85
RSPO4Q2I0M5 MIR1912-201ENST00000410389 80 ntBASIC3.49□□□□□ -1.85
RSPO4Q2I0M5 DBIP2-201ENST00000419076 262 ntBASIC3.49□□□□□ -1.85
RSPO4Q2I0M5 SNORA71B-202ENST00000439232 272 ntBASIC3.49□□□□□ -1.85
RSPO4Q2I0M5 AC245102.2-201ENST00000448956 180 ntBASIC3.49□□□□□ -1.85
RSPO4Q2I0M5 snoU13.4-201ENST00000458916 104 ntBASIC3.49□□□□□ -1.85
RSPO4Q2I0M5 AC010598.1-201ENST00000510378 103 ntBASIC3.49□□□□□ -1.85
RSPO4Q2I0M5 RAC1P2-201ENST00000511164 579 ntBASIC3.49□□□□□ -1.85
RSPO4Q2I0M5 RNA5SP20-201ENST00000515976 84 ntBASIC3.49□□□□□ -1.85
RSPO4Q2I0M5 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC3.49□□□□□ -1.85
RSPO4Q2I0M5 AP000553.6-201ENST00000641242 118 ntBASIC3.49□□□□□ -1.85
RSPO4Q2I0M5 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
RSPO4Q2I0M5 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
RSPO4Q2I0M5 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
RSPO4Q2I0M5 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
RSPO4Q2I0M5 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
RSPO4Q2I0M5 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.48□□□□□ -1.85
RSPO4Q2I0M5 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 116.2 ms