RNA–Protein interactions for RNA: ENST00000458916.1

snoU13.4-201, humanhuman

BASIC

Gene snoU13, Length 104 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
snoU13.4-201ENST00000458916 CHIC1Q5VXU3 224 aa10.65□□□□□ -0.7
snoU13.4-201ENST00000458916 AEBP2Q6ZN18 517 aaPredicted RBP10.23□□□□□ -0.77
snoU13.4-201ENST00000458916 PHF23Q9BUL5 403 aaPredicted RBP9.43□□□□□ -0.9
snoU13.4-201ENST00000458916 PLPPR3Q6T4P5 718 aa8.95□□□□□ -0.98
snoU13.4-201ENST00000458916 EHMT2Q96KQ7 1210 aa8.73□□□□□ -1.01
snoU13.4-201ENST00000458916 SENP3Q9H4L4 574 aaPredicted RBP8.58□□□□□ -1.04
snoU13.4-201ENST00000458916 KCNA4P22459 653 aa8.52□□□□□ -1.05
snoU13.4-201ENST00000458916 CSRNP3Q8WYN3 585 aa8.37□□□□□ -1.07
snoU13.4-201ENST00000458916 SLC24A1O60721 1099 aa8.34□□□□□ -1.07
snoU13.4-201ENST00000458916 ADRA2BP18089 450 aa8.32□□□□□ -1.08
snoU13.4-201ENST00000458916 SLC4A1APQ9BWU0 796 aaKnown RBP8.23□□□□□ -1.09
snoU13.4-201ENST00000458916 PPP6R1Q9UPN7 881 aa8.09□□□□□ -1.11
snoU13.4-201ENST00000458916 AMER1Q5JTC6 1135 aaPredicted RBP8.03□□□□□ -1.12
snoU13.4-201ENST00000458916 RTN4Q9NQC3 1192 aaKnown RBP8.02□□□□□ -1.13
snoU13.4-201ENST00000458916 PPP4R3CPQ6ZMV5 832 aa7.95□□□□□ -1.14
snoU13.4-201ENST00000458916 NCBP3Q53F19 620 aaKnown RBP7.94□□□□□ -1.14
snoU13.4-201ENST00000458916 ZBTB22O15209 634 aa7.86□□□□□ -1.15
snoU13.4-201ENST00000458916 FOXD1Q16676 465 aa7.86□□□□□ -1.15
snoU13.4-201ENST00000458916 NPM3O75607 178 aaKnown RBP7.82□□□□□ -1.16
snoU13.4-201ENST00000458916 FOXD4L1Q9NU39 408 aa7.66□□□□□ -1.18
snoU13.4-201ENST00000458916 CNKSR2Q8WXI2 1034 aa7.6□□□□□ -1.19
snoU13.4-201ENST00000458916 DNAJC5BQ9UF47 199 aa7.58□□□□□ -1.2
snoU13.4-201ENST00000458916 PIAS4Q8N2W9 510 aaPredicted RBP7.57□□□□□ -1.2
snoU13.4-201ENST00000458916 FKBP8Q14318 412 aa7.5□□□□□ -1.21
snoU13.4-201ENST00000458916 SCAF1Q9H7N4 1312 aaKnown RBP7.44□□□□□ -1.22
snoU13.4-201ENST00000458916 PLCB2Q00722 1185 aa7.37□□□□□ -1.23
snoU13.4-201ENST00000458916 ATXN8OSP0DMR3 200 aa7.36□□□□□ -1.23
snoU13.4-201ENST00000458916 BCANQ96GW7 911 aa7.32□□□□□ -1.24
snoU13.4-201ENST00000458916 RNF216Q9NWF9 866 aaPredicted RBP7.29□□□□□ -1.24
snoU13.4-201ENST00000458916 PRKCSHP14314 528 aaPredicted RBP7.28□□□□□ -1.24
snoU13.4-201ENST00000458916 TAOK2Q9UL54 1235 aa7.26□□□□□ -1.25
snoU13.4-201ENST00000458916 SLC4A2P04920 1241 aa7.23□□□□□ -1.25
snoU13.4-201ENST00000458916 MYCNP04198 464 aaPredicted RBP7.22□□□□□ -1.25
snoU13.4-201ENST00000458916 HAP1P54257 671 aaPredicted RBP7.22□□□□□ -1.25
snoU13.4-201ENST00000458916 VSIG10Q8N0Z9 540 aa7.18□□□□□ -1.26
snoU13.4-201ENST00000458916 MAPK8IP2Q13387 824 aaPredicted RBP7.16□□□□□ -1.26
snoU13.4-201ENST00000458916 TPRNQ4KMQ1 711 aa7.11□□□□□ -1.27
snoU13.4-201ENST00000458916 HOXD11P31277 338 aaPredicted RBP7.1□□□□□ -1.27
snoU13.4-201ENST00000458916 FBXO3Q9UK99 471 aa7.08□□□□□ -1.28
snoU13.4-201ENST00000458916 DAXXQ9UER7 740 aaPredicted RBP7.07□□□□□ -1.28
snoU13.4-201ENST00000458916 DCAF8L2P0C7V8 631 aa7.02□□□□□ -1.29
snoU13.4-201ENST00000458916 ARXQ96QS3 562 aa7.01□□□□□ -1.29
snoU13.4-201ENST00000458916 KDM2AQ9Y2K7 1162 aa7.01□□□□□ -1.29
snoU13.4-201ENST00000458916 MSH5O43196 834 aa7□□□□□ -1.29
snoU13.4-201ENST00000458916 TIMELESSQ9UNS1 1208 aa6.99□□□□□ -1.29
snoU13.4-201ENST00000458916 ATF5Q9Y2D1 282 aaPredicted RBP6.96□□□□□ -1.3
snoU13.4-201ENST00000458916 DMRT2Q9Y5R5 561 aa6.96□□□□□ -1.3
snoU13.4-201ENST00000458916 VASPP50552 380 aaPredicted RBP6.95□□□□□ -1.3
snoU13.4-201ENST00000458916 PKD2Q13563 968 aa6.94□□□□□ -1.3
snoU13.4-201ENST00000458916 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.94□□□□□ -1.3
snoU13.4-201ENST00000458916 TULP1O00294 542 aaPredicted RBP6.93□□□□□ -1.3
snoU13.4-201ENST00000458916 FBLN2P98095 1184 aa6.93□□□□□ -1.3
snoU13.4-201ENST00000458916 ERICH6Q7L0X2 663 aa6.93□□□□□ -1.3
snoU13.4-201ENST00000458916 BBXQ8WY36 941 aaPredicted RBP6.93□□□□□ -1.3
snoU13.4-201ENST00000458916 IFNLR1Q8IU57 520 aaPredicted RBP6.91□□□□□ -1.3
snoU13.4-201ENST00000458916 PROM2Q8N271 834 aa6.89□□□□□ -1.31
snoU13.4-201ENST00000458916 GTF3C3Q9Y5Q9 886 aa6.89□□□□□ -1.31
snoU13.4-201ENST00000458916 SPDYE4A6NLX3 237 aa6.87□□□□□ -1.31
snoU13.4-201ENST00000458916 PAXIP1Q6ZW49 1069 aaPredicted RBP6.87□□□□□ -1.31
snoU13.4-201ENST00000458916 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.86□□□□□ -1.31
snoU13.4-201ENST00000458916 HNRNPUL2Q1KMD3 747 aaKnown RBP6.86□□□□□ -1.31
snoU13.4-201ENST00000458916 SAMD1Q6SPF0 538 aaPredicted RBP6.86□□□□□ -1.31
snoU13.4-201ENST00000458916 CFAP44Q96MT7 982 aa6.83□□□□□ -1.32
snoU13.4-201ENST00000458916 NPM1P06748 294 aaKnown RBP eCLIP6.82□□□□□ -1.32
snoU13.4-201ENST00000458916 HOMEZQ8IX15 550 aa6.8□□□□□ -1.32
snoU13.4-201ENST00000458916 NBR1Q14596 966 aa6.79□□□□□ -1.32
snoU13.4-201ENST00000458916 SPRYD3Q8NCJ5 442 aa6.79□□□□□ -1.32
snoU13.4-201ENST00000458916 TSHZ2Q9NRE2 1034 aa6.79□□□□□ -1.32
snoU13.4-201ENST00000458916 DNAJC5Q9H3Z4 198 aa6.77□□□□□ -1.33
snoU13.4-201ENST00000458916 ZNF219Q9P2Y4 722 aaPredicted RBP6.77□□□□□ -1.33
snoU13.4-201ENST00000458916 ECM2O94769 699 aaPredicted RBP6.75□□□□□ -1.33
snoU13.4-201ENST00000458916 TMEM132AQ24JP5 1023 aa6.75□□□□□ -1.33
snoU13.4-201ENST00000458916 SPOCK2Q92563 424 aa6.71□□□□□ -1.34
snoU13.4-201ENST00000458916 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.71□□□□□ -1.34
snoU13.4-201ENST00000458916 MKRN4PQ13434 485 aaPredicted RBP6.7□□□□□ -1.34
snoU13.4-201ENST00000458916 U3KPZ7 1027 aaPredicted RBP6.7□□□□□ -1.34
snoU13.4-201ENST00000458916 RGL2O15211 777 aa6.67□□□□□ -1.34
snoU13.4-201ENST00000458916 C14orf37Q86TY3 774 aa6.67□□□□□ -1.34
snoU13.4-201ENST00000458916 KLHL34Q8N239 644 aa6.64□□□□□ -1.35
snoU13.4-201ENST00000458916 APLP2Q06481 763 aa6.62□□□□□ -1.35
snoU13.4-201ENST00000458916 CHGAP10645 457 aaKnown RBP6.6□□□□□ -1.35
snoU13.4-201ENST00000458916 DCAF8L1A6NGE4 600 aa6.55□□□□□ -1.36
snoU13.4-201ENST00000458916 HS6ST3Q8IZP7 471 aa6.55□□□□□ -1.36
snoU13.4-201ENST00000458916 STAG3Q9UJ98 1225 aa6.53□□□□□ -1.36
snoU13.4-201ENST00000458916 RANGAP1P46060 587 aaPredicted RBP6.52□□□□□ -1.37
snoU13.4-201ENST00000458916 PODXL2Q9NZ53 605 aa6.51□□□□□ -1.37
snoU13.4-201ENST00000458916 PLCD3Q8N3E9 789 aa6.49□□□□□ -1.37
snoU13.4-201ENST00000458916 TRIM41Q8WV44 630 aa6.49□□□□□ -1.37
snoU13.4-201ENST00000458916 CIZ1Q9ULV3 898 aaPredicted RBP6.46□□□□□ -1.38
snoU13.4-201ENST00000458916 SUPT5HO00267 1087 aaKnown RBP6.45□□□□□ -1.38
snoU13.4-201ENST00000458916 GTPBP6O43824 516 aaPredicted RBP6.44□□□□□ -1.38
snoU13.4-201ENST00000458916 BRPF1P55201 1214 aaPredicted RBP6.43□□□□□ -1.38
snoU13.4-201ENST00000458916 POLA2Q14181 598 aa6.43□□□□□ -1.38
snoU13.4-201ENST00000458916 NKX1-1Q15270 411 aaPredicted RBP6.43□□□□□ -1.38
snoU13.4-201ENST00000458916 P3H3Q8IVL6 736 aa6.42□□□□□ -1.38
snoU13.4-201ENST00000458916 MIER1Q8N108 512 aa6.42□□□□□ -1.38
snoU13.4-201ENST00000458916 ZBTB47Q9UFB7 747 aaPredicted RBP6.41□□□□□ -1.38
snoU13.4-201ENST00000458916 LMOD2Q6P5Q4 547 aa6.4□□□□□ -1.38
snoU13.4-201ENST00000458916 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.4□□□□□ -1.38
snoU13.4-201ENST00000458916 RNF25Q96BH1 459 aaPredicted RBP6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms