RNA–Protein interactions for RNA: ENST00000505315.1

HMGB1P22-201, Transcript of high mobility group box 1 pseudogene 22, humanhuman

BASIC

Gene HMGB1P22, Length 124 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P22-201ENST00000505315 CHIC1Q5VXU3 224 aa10.47□□□□□ -0.73
HMGB1P22-201ENST00000505315 AEBP2Q6ZN18 517 aaPredicted RBP10.06□□□□□ -0.8
HMGB1P22-201ENST00000505315 PHF23Q9BUL5 403 aaPredicted RBP9.27□□□□□ -0.93
HMGB1P22-201ENST00000505315 PLPPR3Q6T4P5 718 aa8.84□□□□□ -0.99
HMGB1P22-201ENST00000505315 EHMT2Q96KQ7 1210 aa8.82□□□□□ -1
HMGB1P22-201ENST00000505315 SENP3Q9H4L4 574 aaPredicted RBP8.48□□□□□ -1.05
HMGB1P22-201ENST00000505315 KCNA4P22459 653 aa8.46□□□□□ -1.06
HMGB1P22-201ENST00000505315 SLC24A1O60721 1099 aa8.32□□□□□ -1.08
HMGB1P22-201ENST00000505315 ADRA2BP18089 450 aa8.27□□□□□ -1.09
HMGB1P22-201ENST00000505315 CSRNP3Q8WYN3 585 aa8.25□□□□□ -1.09
HMGB1P22-201ENST00000505315 SLC4A1APQ9BWU0 796 aaKnown RBP8.22□□□□□ -1.09
HMGB1P22-201ENST00000505315 PPP6R1Q9UPN7 881 aa7.99□□□□□ -1.13
HMGB1P22-201ENST00000505315 RTN4Q9NQC3 1192 aaKnown RBP7.98□□□□□ -1.13
HMGB1P22-201ENST00000505315 AMER1Q5JTC6 1135 aaPredicted RBP7.97□□□□□ -1.13
HMGB1P22-201ENST00000505315 NCBP3Q53F19 620 aaKnown RBP7.91□□□□□ -1.14
HMGB1P22-201ENST00000505315 PPP4R3CPQ6ZMV5 832 aa7.89□□□□□ -1.15
HMGB1P22-201ENST00000505315 FOXD1Q16676 465 aa7.78□□□□□ -1.16
HMGB1P22-201ENST00000505315 ZBTB22O15209 634 aa7.73□□□□□ -1.17
HMGB1P22-201ENST00000505315 NPM3O75607 178 aaKnown RBP7.73□□□□□ -1.17
HMGB1P22-201ENST00000505315 PIAS4Q8N2W9 510 aaPredicted RBP7.58□□□□□ -1.2
HMGB1P22-201ENST00000505315 FOXD4L1Q9NU39 408 aa7.58□□□□□ -1.2
HMGB1P22-201ENST00000505315 FKBP8Q14318 412 aa7.52□□□□□ -1.21
HMGB1P22-201ENST00000505315 CNKSR2Q8WXI2 1034 aa7.5□□□□□ -1.21
HMGB1P22-201ENST00000505315 SCAF1Q9H7N4 1312 aaKnown RBP7.41□□□□□ -1.22
HMGB1P22-201ENST00000505315 PRKCSHP14314 528 aaPredicted RBP7.34□□□□□ -1.23
HMGB1P22-201ENST00000505315 HAP1P54257 671 aaPredicted RBP7.33□□□□□ -1.24
HMGB1P22-201ENST00000505315 BCANQ96GW7 911 aa7.31□□□□□ -1.24
HMGB1P22-201ENST00000505315 PLCB2Q00722 1185 aa7.3□□□□□ -1.24
HMGB1P22-201ENST00000505315 DCAF8L2P0C7V8 631 aa7.26□□□□□ -1.25
HMGB1P22-201ENST00000505315 TAOK2Q9UL54 1235 aa7.24□□□□□ -1.25
HMGB1P22-201ENST00000505315 ATXN8OSP0DMR3 200 aa7.2□□□□□ -1.26
HMGB1P22-201ENST00000505315 DNAJC5BQ9UF47 199 aa7.2□□□□□ -1.26
HMGB1P22-201ENST00000505315 TPRNQ4KMQ1 711 aa7.18□□□□□ -1.26
HMGB1P22-201ENST00000505315 RNF216Q9NWF9 866 aaPredicted RBP7.16□□□□□ -1.26
HMGB1P22-201ENST00000505315 MYCNP04198 464 aaPredicted RBP7.14□□□□□ -1.27
HMGB1P22-201ENST00000505315 MAPK8IP2Q13387 824 aaPredicted RBP7.14□□□□□ -1.27
HMGB1P22-201ENST00000505315 SLC4A2P04920 1241 aa7.11□□□□□ -1.27
HMGB1P22-201ENST00000505315 VSIG10Q8N0Z9 540 aa7.11□□□□□ -1.27
HMGB1P22-201ENST00000505315 FBXO3Q9UK99 471 aa7.04□□□□□ -1.28
HMGB1P22-201ENST00000505315 DAXXQ9UER7 740 aaPredicted RBP7.03□□□□□ -1.28
HMGB1P22-201ENST00000505315 TULP1O00294 542 aaPredicted RBP6.99□□□□□ -1.29
HMGB1P22-201ENST00000505315 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.99□□□□□ -1.29
HMGB1P22-201ENST00000505315 TIMELESSQ9UNS1 1208 aa6.97□□□□□ -1.29
HMGB1P22-201ENST00000505315 CFAP44Q96MT7 982 aa6.95□□□□□ -1.3
HMGB1P22-201ENST00000505315 PAXIP1Q6ZW49 1069 aaPredicted RBP6.94□□□□□ -1.3
HMGB1P22-201ENST00000505315 ARXQ96QS3 562 aa6.94□□□□□ -1.3
HMGB1P22-201ENST00000505315 KDM2AQ9Y2K7 1162 aa6.94□□□□□ -1.3
HMGB1P22-201ENST00000505315 MSH5O43196 834 aa6.93□□□□□ -1.3
HMGB1P22-201ENST00000505315 HOXD11P31277 338 aaPredicted RBP6.92□□□□□ -1.3
HMGB1P22-201ENST00000505315 FBLN2P98095 1184 aa6.92□□□□□ -1.3
HMGB1P22-201ENST00000505315 VASPP50552 380 aaPredicted RBP6.91□□□□□ -1.3
HMGB1P22-201ENST00000505315 GTF3C3Q9Y5Q9 886 aa6.9□□□□□ -1.3
HMGB1P22-201ENST00000505315 ATF5Q9Y2D1 282 aaPredicted RBP6.89□□□□□ -1.31
HMGB1P22-201ENST00000505315 NBR1Q14596 966 aa6.87□□□□□ -1.31
HMGB1P22-201ENST00000505315 BBXQ8WY36 941 aaPredicted RBP6.87□□□□□ -1.31
HMGB1P22-201ENST00000505315 SPDYE4A6NLX3 237 aa6.86□□□□□ -1.31
HMGB1P22-201ENST00000505315 ERICH6Q7L0X2 663 aa6.86□□□□□ -1.31
HMGB1P22-201ENST00000505315 PKD2Q13563 968 aa6.84□□□□□ -1.31
HMGB1P22-201ENST00000505315 IFNLR1Q8IU57 520 aaPredicted RBP6.84□□□□□ -1.31
HMGB1P22-201ENST00000505315 DMRT2Q9Y5R5 561 aa6.84□□□□□ -1.31
HMGB1P22-201ENST00000505315 HOMEZQ8IX15 550 aa6.83□□□□□ -1.32
HMGB1P22-201ENST00000505315 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.8□□□□□ -1.32
HMGB1P22-201ENST00000505315 ECM2O94769 699 aaPredicted RBP6.8□□□□□ -1.32
HMGB1P22-201ENST00000505315 HNRNPUL2Q1KMD3 747 aaKnown RBP6.8□□□□□ -1.32
HMGB1P22-201ENST00000505315 SAMD1Q6SPF0 538 aaPredicted RBP6.8□□□□□ -1.32
HMGB1P22-201ENST00000505315 TSHZ2Q9NRE2 1034 aa6.8□□□□□ -1.32
HMGB1P22-201ENST00000505315 SPRYD3Q8NCJ5 442 aa6.79□□□□□ -1.32
HMGB1P22-201ENST00000505315 KLHL34Q8N239 644 aa6.78□□□□□ -1.32
HMGB1P22-201ENST00000505315 C14orf37Q86TY3 774 aa6.77□□□□□ -1.33
HMGB1P22-201ENST00000505315 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.77□□□□□ -1.33
HMGB1P22-201ENST00000505315 NPM1P06748 294 aaKnown RBP eCLIP6.76□□□□□ -1.33
HMGB1P22-201ENST00000505315 DCAF8L1A6NGE4 600 aa6.74□□□□□ -1.33
HMGB1P22-201ENST00000505315 ZNF219Q9P2Y4 722 aaPredicted RBP6.73□□□□□ -1.33
HMGB1P22-201ENST00000505315 TMEM132AQ24JP5 1023 aa6.72□□□□□ -1.33
HMGB1P22-201ENST00000505315 SPOCK2Q92563 424 aa6.7□□□□□ -1.34
HMGB1P22-201ENST00000505315 RANGAP1P46060 587 aaPredicted RBP6.69□□□□□ -1.34
HMGB1P22-201ENST00000505315 CHGAP10645 457 aaKnown RBP6.67□□□□□ -1.34
HMGB1P22-201ENST00000505315 RGL2O15211 777 aa6.65□□□□□ -1.34
HMGB1P22-201ENST00000505315 PROM2Q8N271 834 aa6.65□□□□□ -1.34
HMGB1P22-201ENST00000505315 U3KPZ7 1027 aaPredicted RBP6.62□□□□□ -1.35
HMGB1P22-201ENST00000505315 APLP2Q06481 763 aa6.6□□□□□ -1.35
HMGB1P22-201ENST00000505315 MKRN4PQ13434 485 aaPredicted RBP6.6□□□□□ -1.35
HMGB1P22-201ENST00000505315 PODXL2Q9NZ53 605 aa6.59□□□□□ -1.35
HMGB1P22-201ENST00000505315 SUPT5HO00267 1087 aaKnown RBP6.58□□□□□ -1.36
HMGB1P22-201ENST00000505315 PLCD3Q8N3E9 789 aa6.58□□□□□ -1.36
HMGB1P22-201ENST00000505315 CIZ1Q9ULV3 898 aaPredicted RBP6.58□□□□□ -1.36
HMGB1P22-201ENST00000505315 DNAJC5Q9H3Z4 198 aa6.54□□□□□ -1.36
HMGB1P22-201ENST00000505315 MIER1Q8N108 512 aa6.51□□□□□ -1.37
HMGB1P22-201ENST00000505315 STAG3Q9UJ98 1225 aa6.47□□□□□ -1.37
HMGB1P22-201ENST00000505315 TRHP20396 242 aaPredicted RBP6.45□□□□□ -1.38
HMGB1P22-201ENST00000505315 HS6ST3Q8IZP7 471 aa6.45□□□□□ -1.38
HMGB1P22-201ENST00000505315 POLA2Q14181 598 aa6.44□□□□□ -1.38
HMGB1P22-201ENST00000505315 PLEKHG5O94827 1062 aa6.43□□□□□ -1.38
HMGB1P22-201ENST00000505315 NEUROD2Q15784 382 aa6.4□□□□□ -1.38
HMGB1P22-201ENST00000505315 LMOD2Q6P5Q4 547 aa6.4□□□□□ -1.38
HMGB1P22-201ENST00000505315 NPM2Q86SE8 214 aaKnown RBP6.4□□□□□ -1.38
HMGB1P22-201ENST00000505315 TRIM41Q8WV44 630 aa6.4□□□□□ -1.38
HMGB1P22-201ENST00000505315 P3H3Q8IVL6 736 aa6.39□□□□□ -1.39
HMGB1P22-201ENST00000505315 ZBTB47Q9UFB7 747 aaPredicted RBP6.39□□□□□ -1.39
HMGB1P22-201ENST00000505315 BRPF1P55201 1214 aaPredicted RBP6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms