RNA–Protein interactions for RNA: ENST00000626021.2

PTP4A1-205, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 2,203 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-205ENST00000626021 AEBP2Q6ZN18 517 aaPredicted RBP12.75□□□□□ -0.37
PTP4A1-205ENST00000626021 CHIC1Q5VXU3 224 aa12.02□□□□□ -0.48
PTP4A1-205ENST00000626021 POTEDQ86YR6 584 aa11.35□□□□□ -0.59
PTP4A1-205ENST00000626021 SENP3Q9H4L4 574 aaPredicted RBP11.14□□□□□ -0.63
PTP4A1-205ENST00000626021 PHF23Q9BUL5 403 aaPredicted RBP10.8□□□□□ -0.68
PTP4A1-205ENST00000626021 FOXD1Q16676 465 aa10.4□□□□□ -0.74
PTP4A1-205ENST00000626021 MSH5O43196 834 aa10.2□□□□□ -0.78
PTP4A1-205ENST00000626021 PIAS4Q8N2W9 510 aaPredicted RBP9.48□□□□□ -0.89
PTP4A1-205ENST00000626021 CACNB1Q02641 598 aaPredicted RBP9.19□□□□□ -0.94
PTP4A1-205ENST00000626021 PPP6R1Q9UPN7 881 aa8.99□□□□□ -0.97
PTP4A1-205ENST00000626021 ADRA2BP18089 450 aa8.9□□□□□ -0.98
PTP4A1-205ENST00000626021 NISCHQ9Y2I1 1504 aa8.74□□□□□ -1.01
PTP4A1-205ENST00000626021 POTEHQ6S545 545 aa8.72□□□□□ -1.01
PTP4A1-205ENST00000626021 PLPPR3Q6T4P5 718 aa8.69□□□□□ -1.02
PTP4A1-205ENST00000626021 DMRT2Q9Y5R5 561 aa8.69□□□□□ -1.02
PTP4A1-205ENST00000626021 RNF39Q9H2S5 420 aa8.55□□□□□ -1.04
PTP4A1-205ENST00000626021 C1QBPQ07021 282 aaKnown RBP8.44□□□□□ -1.06
PTP4A1-205ENST00000626021 MAPK8IP2Q13387 824 aaPredicted RBP8.42□□□□□ -1.06
PTP4A1-205ENST00000626021 SCAF1Q9H7N4 1312 aaKnown RBP8.35□□□□□ -1.07
PTP4A1-205ENST00000626021 DCAF8L1A6NGE4 600 aa8.23□□□□□ -1.09
PTP4A1-205ENST00000626021 DNAJC5BQ9UF47 199 aa8.1□□□□□ -1.11
PTP4A1-205ENST00000626021 HOXD11P31277 338 aaPredicted RBP8.03□□□□□ -1.12
PTP4A1-205ENST00000626021 SP7Q8TDD2 431 aaPredicted RBP7.78□□□□□ -1.16
PTP4A1-205ENST00000626021 RNF216Q9NWF9 866 aaPredicted RBP7.74□□□□□ -1.17
PTP4A1-205ENST00000626021 CCDC180Q9P1Z9 1646 aa7.74□□□□□ -1.17
PTP4A1-205ENST00000626021 DSG3P32926 999 aa7.69□□□□□ -1.18
PTP4A1-205ENST00000626021 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.59□□□□□ -1.19
PTP4A1-205ENST00000626021 CNKSR2Q8WXI2 1034 aa7.58□□□□□ -1.2
PTP4A1-205ENST00000626021 CHRDL2Q6WN34 429 aa7.54□□□□□ -1.2
PTP4A1-205ENST00000626021 CAPN15O75808 1086 aa7.48□□□□□ -1.21
PTP4A1-205ENST00000626021 RBM42Q9BTD8 480 aaKnown RBP7.48□□□□□ -1.21
PTP4A1-205ENST00000626021 PLSCR2Q9NRY7 297 aa7.47□□□□□ -1.21
PTP4A1-205ENST00000626021 PPP4R3CPQ6ZMV5 832 aa7.45□□□□□ -1.22
PTP4A1-205ENST00000626021 SPINK5Q9NQ38 1064 aaPredicted RBP7.42□□□□□ -1.22
PTP4A1-205ENST00000626021 ZCCHC6Q5VYS8 1495 aaKnown RBP7.4□□□□□ -1.22
PTP4A1-205ENST00000626021 U3KPZ7 1027 aaPredicted RBP7.31□□□□□ -1.24
PTP4A1-205ENST00000626021 DCAF1Q9Y4B6 1507 aa7.31□□□□□ -1.24
PTP4A1-205ENST00000626021 LHX8Q68G74 356 aa7.27□□□□□ -1.25
PTP4A1-205ENST00000626021 APLP2Q06481 763 aa7.27□□□□□ -1.25
PTP4A1-205ENST00000626021 HAX1O00165 279 aa7.25□□□□□ -1.25
PTP4A1-205ENST00000626021 ZNF219Q9P2Y4 722 aaPredicted RBP7.22□□□□□ -1.25
PTP4A1-205ENST00000626021 MYO15BQ96JP2 1530 aa7.18□□□□□ -1.26
PTP4A1-205ENST00000626021 ABCB7O75027 752 aa7.17□□□□□ -1.26
PTP4A1-205ENST00000626021 PIP4P2Q8N4L2 257 aa7.17□□□□□ -1.26
PTP4A1-205ENST00000626021 NCBP3Q53F19 620 aaKnown RBP7.15□□□□□ -1.26
PTP4A1-205ENST00000626021 TRHP20396 242 aaPredicted RBP7.12□□□□□ -1.27
PTP4A1-205ENST00000626021 AKT1S1Q96B36 256 aa7.08□□□□□ -1.28
PTP4A1-205ENST00000626021 NACADO15069 1562 aa7.06□□□□□ -1.28
PTP4A1-205ENST00000626021 EVX2Q03828 476 aa7.05□□□□□ -1.28
PTP4A1-205ENST00000626021 FXR2P51116 673 aaKnown RBP eCLIP7.04□□□□□ -1.28
PTP4A1-205ENST00000626021 PCDH10Q9P2E7 1040 aa7.01□□□□□ -1.29
PTP4A1-205ENST00000626021 ABCC9O60706 1549 aa7□□□□□ -1.29
PTP4A1-205ENST00000626021 HRCP23327 699 aa7□□□□□ -1.29
PTP4A1-205ENST00000626021 SHROOM4Q9ULL8 1493 aa7□□□□□ -1.29
PTP4A1-205ENST00000626021 UNC13AQ9UPW8 1703 aa6.98□□□□□ -1.29
PTP4A1-205ENST00000626021 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.97□□□□□ -1.29
PTP4A1-205ENST00000626021 HNRNPUL2Q1KMD3 747 aaKnown RBP6.97□□□□□ -1.29
PTP4A1-205ENST00000626021 SCRIBQ14160 1630 aa6.97□□□□□ -1.29
PTP4A1-205ENST00000626021 RB1CC1Q8TDY2 1594 aa6.96□□□□□ -1.29
PTP4A1-205ENST00000626021 KCNA4P22459 653 aa6.96□□□□□ -1.29
PTP4A1-205ENST00000626021 REM2Q8IYK8 340 aaPredicted RBP6.94□□□□□ -1.3
PTP4A1-205ENST00000626021 GABBR2O75899 941 aa6.92□□□□□ -1.3
PTP4A1-205ENST00000626021 POTEMA6NI47 508 aa6.86□□□□□ -1.31
PTP4A1-205ENST00000626021 NPM3O75607 178 aaKnown RBP6.86□□□□□ -1.31
PTP4A1-205ENST00000626021 PITPNM1O00562 1244 aa6.85□□□□□ -1.31
PTP4A1-205ENST00000626021 C19orf67A6NJJ6 358 aa6.85□□□□□ -1.31
PTP4A1-205ENST00000626021 DCAF8L2P0C7V8 631 aa6.85□□□□□ -1.31
PTP4A1-205ENST00000626021 SAMD1Q6SPF0 538 aaPredicted RBP6.84□□□□□ -1.31
PTP4A1-205ENST00000626021 SUPT5HO00267 1087 aaKnown RBP6.83□□□□□ -1.32
PTP4A1-205ENST00000626021 PELP1Q8IZL8 1130 aaKnown RBP6.82□□□□□ -1.32
PTP4A1-205ENST00000626021 POTEGQ6S5H5 508 aa6.81□□□□□ -1.32
PTP4A1-205ENST00000626021 BICRAQ9NZM4 1560 aa6.78□□□□□ -1.32
PTP4A1-205ENST00000626021 PCGF6Q9BYE7 350 aa6.77□□□□□ -1.33
PTP4A1-205ENST00000626021 BAZ1AQ9NRL2 1556 aaPredicted RBP6.77□□□□□ -1.33
PTP4A1-205ENST00000626021 RSF1Q96T23 1441 aaPredicted RBP6.76□□□□□ -1.33
PTP4A1-205ENST00000626021 POLA2Q14181 598 aa6.76□□□□□ -1.33
PTP4A1-205ENST00000626021 ZBTB12Q9Y330 459 aaPredicted RBP6.76□□□□□ -1.33
PTP4A1-205ENST00000626021 CLCN6P51797 869 aa6.75□□□□□ -1.33
PTP4A1-205ENST00000626021 SMARCA4P51532 1647 aa6.75□□□□□ -1.33
PTP4A1-205ENST00000626021 POTEIP0CG38 1075 aa6.74□□□□□ -1.33
PTP4A1-205ENST00000626021 MROH2BQ7Z745 1585 aa6.73□□□□□ -1.33
PTP4A1-205ENST00000626021 WIZO95785 1651 aa6.73□□□□□ -1.33
PTP4A1-205ENST00000626021 EIF4G1Q04637 1599 aaKnown RBP6.71□□□□□ -1.33
PTP4A1-205ENST00000626021 CECR2Q9BXF3 1484 aa6.71□□□□□ -1.33
PTP4A1-205ENST00000626021 PPARGC1BQ86YN6 1023 aaKnown RBP6.71□□□□□ -1.34
PTP4A1-205ENST00000626021 PEG3Q9GZU2 1588 aa6.7□□□□□ -1.34
PTP4A1-205ENST00000626021 ZEB1P37275 1124 aaPredicted RBP6.69□□□□□ -1.34
PTP4A1-205ENST00000626021 SLC4A2P04920 1241 aa6.69□□□□□ -1.34
PTP4A1-205ENST00000626021 TRIM26Q12899 539 aaPredicted RBP6.69□□□□□ -1.34
PTP4A1-205ENST00000626021 TOP2AP11388 1531 aaKnown RBP6.68□□□□□ -1.34
PTP4A1-205ENST00000626021 SLC4A1APQ9BWU0 796 aaKnown RBP6.68□□□□□ -1.34
PTP4A1-205ENST00000626021 PRKAR2AP13861 404 aaKnown RBP6.66□□□□□ -1.34
PTP4A1-205ENST00000626021 OTUD5Q96G74 571 aa6.66□□□□□ -1.34
PTP4A1-205ENST00000626021 SMARCA2P51531 1590 aa6.62□□□□□ -1.35
PTP4A1-205ENST00000626021 MYT1Q01538 1121 aa6.6□□□□□ -1.35
PTP4A1-205ENST00000626021 EHMT2Q96KQ7 1210 aa6.59□□□□□ -1.35
PTP4A1-205ENST00000626021 PRDM2Q13029 1718 aa6.58□□□□□ -1.36
PTP4A1-205ENST00000626021 LOC105371045A0A1W2PR82 267 aa6.57□□□□□ -1.36
PTP4A1-205ENST00000626021 DCBLD2Q96PD2 775 aa6.56□□□□□ -1.36
PTP4A1-205ENST00000626021 OSCARQ8IYS5 282 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms