Protein–RNA interactions for Protein: Q9Y5W9

SNX11, Sorting nexin-11, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11Q9Y5W9 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.74■□□□□ 0.59
SNX11Q9Y5W9 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SNX11Q9Y5W9 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.74■□□□□ 0.59
SNX11Q9Y5W9 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.74■□□□□ 0.59
SNX11Q9Y5W9 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SNX11Q9Y5W9 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SNX11Q9Y5W9 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SNX11Q9Y5W9 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
SNX11Q9Y5W9 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SNX11Q9Y5W9 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC18.74■□□□□ 0.59
SNX11Q9Y5W9 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC18.74■□□□□ 0.59
SNX11Q9Y5W9 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.74■□□□□ 0.59
SNX11Q9Y5W9 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SNX11Q9Y5W9 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.74■□□□□ 0.59
SNX11Q9Y5W9 CR769767.2-201ENST00000622735 460 ntBASIC18.74■□□□□ 0.59
SNX11Q9Y5W9 AC012313.10-201ENST00000623509 926 ntBASIC18.74■□□□□ 0.59
SNX11Q9Y5W9 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC18.74■□□□□ 0.59
SNX11Q9Y5W9 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SNX11Q9Y5W9 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SNX11Q9Y5W9 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.74■□□□□ 0.59
SNX11Q9Y5W9 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
SNX11Q9Y5W9 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SNX11Q9Y5W9 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SNX11Q9Y5W9 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SNX11Q9Y5W9 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SNX11Q9Y5W9 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SNX11Q9Y5W9 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SNX11Q9Y5W9 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SNX11Q9Y5W9 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.73■□□□□ 0.59
SNX11Q9Y5W9 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SNX11Q9Y5W9 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SNX11Q9Y5W9 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SNX11Q9Y5W9 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC18.73■□□□□ 0.59
SNX11Q9Y5W9 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SNX11Q9Y5W9 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SNX11Q9Y5W9 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
SNX11Q9Y5W9 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC18.73■□□□□ 0.59
SNX11Q9Y5W9 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SNX11Q9Y5W9 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.73■□□□□ 0.59
SNX11Q9Y5W9 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
SNX11Q9Y5W9 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SNX11Q9Y5W9 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
SNX11Q9Y5W9 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SNX11Q9Y5W9 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.73■□□□□ 0.59
SNX11Q9Y5W9 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SNX11Q9Y5W9 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
SNX11Q9Y5W9 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SNX11Q9Y5W9 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SNX11Q9Y5W9 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SNX11Q9Y5W9 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.72■□□□□ 0.59
SNX11Q9Y5W9 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
SNX11Q9Y5W9 SPDYE13P-201ENST00000445314 798 ntBASIC18.72■□□□□ 0.59
SNX11Q9Y5W9 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC18.72■□□□□ 0.59
SNX11Q9Y5W9 VPS72-207ENST00000640458 689 ntTSL 5 BASIC18.72■□□□□ 0.59
SNX11Q9Y5W9 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SNX11Q9Y5W9 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
SNX11Q9Y5W9 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SNX11Q9Y5W9 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.72■□□□□ 0.59
SNX11Q9Y5W9 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SNX11Q9Y5W9 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.72■□□□□ 0.59
SNX11Q9Y5W9 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
SNX11Q9Y5W9 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SNX11Q9Y5W9 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SNX11Q9Y5W9 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18.71■□□□□ 0.59
SNX11Q9Y5W9 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
SNX11Q9Y5W9 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.71■□□□□ 0.59
SNX11Q9Y5W9 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SNX11Q9Y5W9 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.71■□□□□ 0.59
SNX11Q9Y5W9 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SNX11Q9Y5W9 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SNX11Q9Y5W9 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
SNX11Q9Y5W9 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SNX11Q9Y5W9 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.71■□□□□ 0.59
SNX11Q9Y5W9 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.71■□□□□ 0.59
SNX11Q9Y5W9 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SNX11Q9Y5W9 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SNX11Q9Y5W9 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.71■□□□□ 0.59
SNX11Q9Y5W9 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SNX11Q9Y5W9 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC18.71■□□□□ 0.59
SNX11Q9Y5W9 ATP5G2P1-201ENST00000433580 426 ntBASIC18.71■□□□□ 0.59
SNX11Q9Y5W9 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC18.71■□□□□ 0.59
SNX11Q9Y5W9 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC18.71■□□□□ 0.59
SNX11Q9Y5W9 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SNX11Q9Y5W9 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.71■□□□□ 0.59
SNX11Q9Y5W9 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SNX11Q9Y5W9 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SNX11Q9Y5W9 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.71■□□□□ 0.59
SNX11Q9Y5W9 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SNX11Q9Y5W9 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SNX11Q9Y5W9 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SNX11Q9Y5W9 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SNX11Q9Y5W9 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
SNX11Q9Y5W9 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
SNX11Q9Y5W9 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.58
SNX11Q9Y5W9 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
SNX11Q9Y5W9 AC104417.2-201ENST00000562989 1793 ntBASIC18.7■□□□□ 0.58
SNX11Q9Y5W9 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.7■□□□□ 0.58
SNX11Q9Y5W9 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SNX11Q9Y5W9 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SNX11Q9Y5W9 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms