Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHGB3Q9Y5G1 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHGB3Q9Y5G1 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.97■□□□□ 0.47
PCDHGB3Q9Y5G1 AC104417.2-201ENST00000562989 1793 ntBASIC17.96■□□□□ 0.47
PCDHGB3Q9Y5G1 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHGB3Q9Y5G1 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHGB3Q9Y5G1 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHGB3Q9Y5G1 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHGB3Q9Y5G1 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC17.96■□□□□ 0.47
PCDHGB3Q9Y5G1 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC17.96■□□□□ 0.47
PCDHGB3Q9Y5G1 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
PCDHGB3Q9Y5G1 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
PCDHGB3Q9Y5G1 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
PCDHGB3Q9Y5G1 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC17.96■□□□□ 0.47
PCDHGB3Q9Y5G1 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC17.96■□□□□ 0.47
PCDHGB3Q9Y5G1 CABP2-204ENST00000636477 941 ntTSL 5 BASIC17.96■□□□□ 0.47
PCDHGB3Q9Y5G1 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHGB3Q9Y5G1 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHGB3Q9Y5G1 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHGB3Q9Y5G1 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHGB3Q9Y5G1 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.96■□□□□ 0.47
PCDHGB3Q9Y5G1 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.96■□□□□ 0.47
PCDHGB3Q9Y5G1 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
PCDHGB3Q9Y5G1 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHGB3Q9Y5G1 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
PCDHGB3Q9Y5G1 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.46
PCDHGB3Q9Y5G1 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHGB3Q9Y5G1 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHGB3Q9Y5G1 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
PCDHGB3Q9Y5G1 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
PCDHGB3Q9Y5G1 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.95■□□□□ 0.46
PCDHGB3Q9Y5G1 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHGB3Q9Y5G1 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHGB3Q9Y5G1 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
PCDHGB3Q9Y5G1 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHGB3Q9Y5G1 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHGB3Q9Y5G1 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.95■□□□□ 0.46
PCDHGB3Q9Y5G1 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.95■□□□□ 0.46
PCDHGB3Q9Y5G1 KRASP1-201ENST00000407852 552 ntBASIC17.95■□□□□ 0.46
PCDHGB3Q9Y5G1 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHGB3Q9Y5G1 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHGB3Q9Y5G1 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC17.95■□□□□ 0.46
PCDHGB3Q9Y5G1 F2R-202ENST00000505600 442 ntTSL 2 BASIC17.95■□□□□ 0.46
PCDHGB3Q9Y5G1 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC17.95■□□□□ 0.46
PCDHGB3Q9Y5G1 Six3os1_6.1-201ENST00000620790 196 ntBASIC17.95■□□□□ 0.46
PCDHGB3Q9Y5G1 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
PCDHGB3Q9Y5G1 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC17.95■□□□□ 0.46
PCDHGB3Q9Y5G1 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.95■□□□□ 0.46
PCDHGB3Q9Y5G1 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHGB3Q9Y5G1 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHGB3Q9Y5G1 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC17.95■□□□□ 0.46
PCDHGB3Q9Y5G1 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHGB3Q9Y5G1 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
PCDHGB3Q9Y5G1 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHGB3Q9Y5G1 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHGB3Q9Y5G1 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHGB3Q9Y5G1 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHGB3Q9Y5G1 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHGB3Q9Y5G1 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC17.95■□□□□ 0.46
PCDHGB3Q9Y5G1 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGB3Q9Y5G1 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC17.94■□□□□ 0.46
PCDHGB3Q9Y5G1 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC17.94■□□□□ 0.46
PCDHGB3Q9Y5G1 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGB3Q9Y5G1 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGB3Q9Y5G1 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.94■□□□□ 0.46
PCDHGB3Q9Y5G1 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGB3Q9Y5G1 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC17.94■□□□□ 0.46
PCDHGB3Q9Y5G1 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGB3Q9Y5G1 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.94■□□□□ 0.46
PCDHGB3Q9Y5G1 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGB3Q9Y5G1 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.94■□□□□ 0.46
PCDHGB3Q9Y5G1 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.94■□□□□ 0.46
PCDHGB3Q9Y5G1 MDFI-202ENST00000373050 809 ntTSL 2 BASIC17.94■□□□□ 0.46
PCDHGB3Q9Y5G1 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17.94■□□□□ 0.46
PCDHGB3Q9Y5G1 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC17.94■□□□□ 0.46
PCDHGB3Q9Y5G1 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC17.94■□□□□ 0.46
PCDHGB3Q9Y5G1 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGB3Q9Y5G1 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC17.94■□□□□ 0.46
PCDHGB3Q9Y5G1 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGB3Q9Y5G1 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
PCDHGB3Q9Y5G1 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.94■□□□□ 0.46
PCDHGB3Q9Y5G1 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC17.94■□□□□ 0.46
PCDHGB3Q9Y5G1 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGB3Q9Y5G1 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGB3Q9Y5G1 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGB3Q9Y5G1 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGB3Q9Y5G1 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGB3Q9Y5G1 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGB3Q9Y5G1 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGB3Q9Y5G1 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGB3Q9Y5G1 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGB3Q9Y5G1 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC17.94■□□□□ 0.46
PCDHGB3Q9Y5G1 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC17.94■□□□□ 0.46
PCDHGB3Q9Y5G1 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC17.94■□□□□ 0.46
PCDHGB3Q9Y5G1 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
PCDHGB3Q9Y5G1 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.94■□□□□ 0.46
PCDHGB3Q9Y5G1 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGB3Q9Y5G1 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.93■□□□□ 0.46
PCDHGB3Q9Y5G1 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGB3Q9Y5G1 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms