Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHB11Q9Y5F2 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.54■□□□□ 0.56
PCDHB11Q9Y5F2 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHB11Q9Y5F2 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.53■□□□□ 0.56
PCDHB11Q9Y5F2 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHB11Q9Y5F2 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHB11Q9Y5F2 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.53■□□□□ 0.56
PCDHB11Q9Y5F2 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHB11Q9Y5F2 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
PCDHB11Q9Y5F2 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC18.53■□□□□ 0.56
PCDHB11Q9Y5F2 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.53■□□□□ 0.56
PCDHB11Q9Y5F2 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC18.53■□□□□ 0.56
PCDHB11Q9Y5F2 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC18.53■□□□□ 0.56
PCDHB11Q9Y5F2 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.53■□□□□ 0.56
PCDHB11Q9Y5F2 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC18.53■□□□□ 0.56
PCDHB11Q9Y5F2 FAM207BP-201ENST00000447172 505 ntBASIC18.53■□□□□ 0.56
PCDHB11Q9Y5F2 AC091390.4-202ENST00000476426 537 ntBASIC18.53■□□□□ 0.56
PCDHB11Q9Y5F2 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHB11Q9Y5F2 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC18.53■□□□□ 0.56
PCDHB11Q9Y5F2 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC18.53■□□□□ 0.56
PCDHB11Q9Y5F2 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.53■□□□□ 0.56
PCDHB11Q9Y5F2 LTBR-211ENST00000543190 785 ntTSL 3 BASIC18.53■□□□□ 0.56
PCDHB11Q9Y5F2 WWOX-216ENST00000569818 525 ntBASIC18.53■□□□□ 0.56
PCDHB11Q9Y5F2 GPX4-207ENST00000589115 812 ntTSL 2 BASIC18.53■□□□□ 0.56
PCDHB11Q9Y5F2 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHB11Q9Y5F2 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.53■□□□□ 0.56
PCDHB11Q9Y5F2 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
PCDHB11Q9Y5F2 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.53■□□□□ 0.56
PCDHB11Q9Y5F2 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.53■□□□□ 0.56
PCDHB11Q9Y5F2 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
PCDHB11Q9Y5F2 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
PCDHB11Q9Y5F2 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.53■□□□□ 0.56
PCDHB11Q9Y5F2 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHB11Q9Y5F2 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.53■□□□□ 0.56
PCDHB11Q9Y5F2 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHB11Q9Y5F2 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
PCDHB11Q9Y5F2 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHB11Q9Y5F2 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.53■□□□□ 0.56
PCDHB11Q9Y5F2 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
PCDHB11Q9Y5F2 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.52■□□□□ 0.56
PCDHB11Q9Y5F2 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
PCDHB11Q9Y5F2 MED25-212ENST00000618715 1467 ntTSL 5 BASIC18.52■□□□□ 0.56
PCDHB11Q9Y5F2 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHB11Q9Y5F2 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHB11Q9Y5F2 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHB11Q9Y5F2 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHB11Q9Y5F2 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHB11Q9Y5F2 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.52■□□□□ 0.56
PCDHB11Q9Y5F2 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHB11Q9Y5F2 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.52■□□□□ 0.56
PCDHB11Q9Y5F2 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC18.52■□□□□ 0.56
PCDHB11Q9Y5F2 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
PCDHB11Q9Y5F2 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHB11Q9Y5F2 TSPY21P-201ENST00000433481 731 ntBASIC18.52■□□□□ 0.56
PCDHB11Q9Y5F2 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.52■□□□□ 0.56
PCDHB11Q9Y5F2 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC18.52■□□□□ 0.56
PCDHB11Q9Y5F2 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.56
PCDHB11Q9Y5F2 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC18.52■□□□□ 0.56
PCDHB11Q9Y5F2 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHB11Q9Y5F2 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
PCDHB11Q9Y5F2 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.52■□□□□ 0.56
PCDHB11Q9Y5F2 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.52■□□□□ 0.55
PCDHB11Q9Y5F2 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.52■□□□□ 0.55
PCDHB11Q9Y5F2 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
PCDHB11Q9Y5F2 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.52■□□□□ 0.55
PCDHB11Q9Y5F2 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
PCDHB11Q9Y5F2 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.52■□□□□ 0.55
PCDHB11Q9Y5F2 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
PCDHB11Q9Y5F2 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
PCDHB11Q9Y5F2 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.51■□□□□ 0.55
PCDHB11Q9Y5F2 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.51■□□□□ 0.55
PCDHB11Q9Y5F2 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
PCDHB11Q9Y5F2 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.51■□□□□ 0.55
PCDHB11Q9Y5F2 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHB11Q9Y5F2 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHB11Q9Y5F2 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHB11Q9Y5F2 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHB11Q9Y5F2 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC18.51■□□□□ 0.55
PCDHB11Q9Y5F2 AC006011.2-201ENST00000621313 1158 ntBASIC18.51■□□□□ 0.55
PCDHB11Q9Y5F2 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
PCDHB11Q9Y5F2 AC116562.4-202ENST00000641738 218 ntBASIC18.51■□□□□ 0.55
PCDHB11Q9Y5F2 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
PCDHB11Q9Y5F2 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHB11Q9Y5F2 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHB11Q9Y5F2 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHB11Q9Y5F2 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHB11Q9Y5F2 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHB11Q9Y5F2 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHB11Q9Y5F2 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
PCDHB11Q9Y5F2 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHB11Q9Y5F2 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.51■□□□□ 0.55
PCDHB11Q9Y5F2 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
PCDHB11Q9Y5F2 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHB11Q9Y5F2 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHB11Q9Y5F2 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18.5■□□□□ 0.55
PCDHB11Q9Y5F2 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC18.5■□□□□ 0.55
PCDHB11Q9Y5F2 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.5■□□□□ 0.55
PCDHB11Q9Y5F2 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHB11Q9Y5F2 AC004408.2-201ENST00000623613 2777 ntBASIC18.5■□□□□ 0.55
PCDHB11Q9Y5F2 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms