Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SYNPO2Q9UMS6 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC21.81■■□□□ 1.08
SYNPO2Q9UMS6 ELP6-205ENST00000439305 880 ntTSL 2 BASIC21.81■■□□□ 1.08
SYNPO2Q9UMS6 SPDYE13P-201ENST00000445314 798 ntBASIC21.81■■□□□ 1.08
SYNPO2Q9UMS6 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC21.81■■□□□ 1.08
SYNPO2Q9UMS6 VENTXP5-201ENST00000523979 775 ntBASIC21.81■■□□□ 1.08
SYNPO2Q9UMS6 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC21.81■■□□□ 1.08
SYNPO2Q9UMS6 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC21.81■■□□□ 1.08
SYNPO2Q9UMS6 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SYNPO2Q9UMS6 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC21.81■■□□□ 1.08
SYNPO2Q9UMS6 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SYNPO2Q9UMS6 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SYNPO2Q9UMS6 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC21.8■■□□□ 1.08
SYNPO2Q9UMS6 AC034236.2-201ENST00000606662 1610 ntBASIC21.8■■□□□ 1.08
SYNPO2Q9UMS6 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC21.8■■□□□ 1.08
SYNPO2Q9UMS6 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SYNPO2Q9UMS6 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC21.8■■□□□ 1.08
SYNPO2Q9UMS6 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC21.8■■□□□ 1.08
SYNPO2Q9UMS6 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SYNPO2Q9UMS6 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
SYNPO2Q9UMS6 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SYNPO2Q9UMS6 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC21.8■■□□□ 1.08
SYNPO2Q9UMS6 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SYNPO2Q9UMS6 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SYNPO2Q9UMS6 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC21.8■■□□□ 1.08
SYNPO2Q9UMS6 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
SYNPO2Q9UMS6 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SYNPO2Q9UMS6 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC21.8■■□□□ 1.08
SYNPO2Q9UMS6 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SYNPO2Q9UMS6 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC21.8■■□□□ 1.08
SYNPO2Q9UMS6 CBFB-203ENST00000561924 584 ntTSL 5 BASIC21.8■■□□□ 1.08
SYNPO2Q9UMS6 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
SYNPO2Q9UMS6 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC21.8■■□□□ 1.08
SYNPO2Q9UMS6 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC21.8■■□□□ 1.08
SYNPO2Q9UMS6 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC21.8■■□□□ 1.08
SYNPO2Q9UMS6 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
SYNPO2Q9UMS6 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC21.79■■□□□ 1.08
SYNPO2Q9UMS6 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
SYNPO2Q9UMS6 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SYNPO2Q9UMS6 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SYNPO2Q9UMS6 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SYNPO2Q9UMS6 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC21.79■■□□□ 1.08
SYNPO2Q9UMS6 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SYNPO2Q9UMS6 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SYNPO2Q9UMS6 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SYNPO2Q9UMS6 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC21.79■■□□□ 1.08
SYNPO2Q9UMS6 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC21.79■■□□□ 1.08
SYNPO2Q9UMS6 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
SYNPO2Q9UMS6 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC21.79■■□□□ 1.08
SYNPO2Q9UMS6 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
SYNPO2Q9UMS6 CLN6-214ENST00000636314 442 ntTSL 3 BASIC21.79■■□□□ 1.08
SYNPO2Q9UMS6 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC21.79■■□□□ 1.08
SYNPO2Q9UMS6 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC21.79■■□□□ 1.08
SYNPO2Q9UMS6 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC21.79■■□□□ 1.08
SYNPO2Q9UMS6 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SYNPO2Q9UMS6 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SYNPO2Q9UMS6 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC21.78■■□□□ 1.08
SYNPO2Q9UMS6 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
SYNPO2Q9UMS6 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
SYNPO2Q9UMS6 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC21.78■■□□□ 1.08
SYNPO2Q9UMS6 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SYNPO2Q9UMS6 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SYNPO2Q9UMS6 HLA-F-220ENST00000434407 884 ntBASIC21.78■■□□□ 1.08
SYNPO2Q9UMS6 KRT18P23-201ENST00000435622 1283 ntBASIC21.78■■□□□ 1.08
SYNPO2Q9UMS6 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SYNPO2Q9UMS6 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SYNPO2Q9UMS6 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC21.78■■□□□ 1.08
SYNPO2Q9UMS6 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC21.78■■□□□ 1.08
SYNPO2Q9UMS6 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC21.78■■□□□ 1.08
SYNPO2Q9UMS6 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SYNPO2Q9UMS6 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
SYNPO2Q9UMS6 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SYNPO2Q9UMS6 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
SYNPO2Q9UMS6 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SYNPO2Q9UMS6 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SYNPO2Q9UMS6 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
SYNPO2Q9UMS6 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
SYNPO2Q9UMS6 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC21.77■■□□□ 1.08
SYNPO2Q9UMS6 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
SYNPO2Q9UMS6 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC21.77■■□□□ 1.08
SYNPO2Q9UMS6 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC21.77■■□□□ 1.08
SYNPO2Q9UMS6 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
SYNPO2Q9UMS6 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC21.77■■□□□ 1.08
SYNPO2Q9UMS6 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC21.77■■□□□ 1.08
SYNPO2Q9UMS6 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
SYNPO2Q9UMS6 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
SYNPO2Q9UMS6 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SYNPO2Q9UMS6 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
SYNPO2Q9UMS6 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SYNPO2Q9UMS6 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
SYNPO2Q9UMS6 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SYNPO2Q9UMS6 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
SYNPO2Q9UMS6 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
SYNPO2Q9UMS6 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SYNPO2Q9UMS6 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SYNPO2Q9UMS6 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SYNPO2Q9UMS6 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SYNPO2Q9UMS6 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SYNPO2Q9UMS6 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC21.76■■□□□ 1.07
SYNPO2Q9UMS6 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms