Protein–RNA interactions for Protein: Q9UGM1

CHRNA9, Neuronal acetylcholine receptor subunit alpha-9, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA9Q9UGM1 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC17.28■□□□□ 0.36
CHRNA9Q9UGM1 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHRNA9Q9UGM1 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC17.28■□□□□ 0.36
CHRNA9Q9UGM1 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CHRNA9Q9UGM1 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHRNA9Q9UGM1 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHRNA9Q9UGM1 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CHRNA9Q9UGM1 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHRNA9Q9UGM1 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
CHRNA9Q9UGM1 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHRNA9Q9UGM1 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.28■□□□□ 0.36
CHRNA9Q9UGM1 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHRNA9Q9UGM1 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CHRNA9Q9UGM1 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CHRNA9Q9UGM1 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHRNA9Q9UGM1 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHRNA9Q9UGM1 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.28■□□□□ 0.36
CHRNA9Q9UGM1 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CHRNA9Q9UGM1 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.28■□□□□ 0.36
CHRNA9Q9UGM1 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.27■□□□□ 0.36
CHRNA9Q9UGM1 FEM1AP3-201ENST00000403722 1741 ntBASIC17.27■□□□□ 0.36
CHRNA9Q9UGM1 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
CHRNA9Q9UGM1 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CHRNA9Q9UGM1 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CHRNA9Q9UGM1 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
CHRNA9Q9UGM1 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.27■□□□□ 0.36
CHRNA9Q9UGM1 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC17.27■□□□□ 0.36
CHRNA9Q9UGM1 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.27■□□□□ 0.36
CHRNA9Q9UGM1 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.27■□□□□ 0.36
CHRNA9Q9UGM1 B3GAT3P1-201ENST00000471720 806 ntBASIC17.27■□□□□ 0.36
CHRNA9Q9UGM1 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CHRNA9Q9UGM1 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC17.27■□□□□ 0.36
CHRNA9Q9UGM1 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC17.27■□□□□ 0.36
CHRNA9Q9UGM1 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CHRNA9Q9UGM1 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC17.27■□□□□ 0.36
CHRNA9Q9UGM1 NEFHP1-201ENST00000412845 2629 ntBASIC17.27■□□□□ 0.35
CHRNA9Q9UGM1 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CHRNA9Q9UGM1 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.27■□□□□ 0.35
CHRNA9Q9UGM1 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CHRNA9Q9UGM1 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CHRNA9Q9UGM1 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.26■□□□□ 0.35
CHRNA9Q9UGM1 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CHRNA9Q9UGM1 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHRNA9Q9UGM1 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHRNA9Q9UGM1 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHRNA9Q9UGM1 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.26■□□□□ 0.35
CHRNA9Q9UGM1 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHRNA9Q9UGM1 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHRNA9Q9UGM1 AL031598.1-201ENST00000561511 1773 ntBASIC17.26■□□□□ 0.35
CHRNA9Q9UGM1 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHRNA9Q9UGM1 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHRNA9Q9UGM1 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHRNA9Q9UGM1 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
CHRNA9Q9UGM1 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CHRNA9Q9UGM1 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CHRNA9Q9UGM1 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC17.26■□□□□ 0.35
CHRNA9Q9UGM1 AC011506.1-201ENST00000474329 610 ntBASIC17.26■□□□□ 0.35
CHRNA9Q9UGM1 PRSS44-201ENST00000515154 1146 ntBASIC17.26■□□□□ 0.35
CHRNA9Q9UGM1 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.26■□□□□ 0.35
CHRNA9Q9UGM1 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC17.26■□□□□ 0.35
CHRNA9Q9UGM1 AC130371.2-201ENST00000619443 611 ntBASIC17.26■□□□□ 0.35
CHRNA9Q9UGM1 DECR2-212ENST00000627716 352 ntTSL 2 BASIC17.26■□□□□ 0.35
CHRNA9Q9UGM1 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
CHRNA9Q9UGM1 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CHRNA9Q9UGM1 AC093525.10-201ENST00000625130 1569 ntBASIC17.26■□□□□ 0.35
CHRNA9Q9UGM1 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
CHRNA9Q9UGM1 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.26■□□□□ 0.35
CHRNA9Q9UGM1 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.26■□□□□ 0.35
CHRNA9Q9UGM1 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC17.26■□□□□ 0.35
CHRNA9Q9UGM1 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHRNA9Q9UGM1 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.26■□□□□ 0.35
CHRNA9Q9UGM1 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHRNA9Q9UGM1 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.25■□□□□ 0.35
CHRNA9Q9UGM1 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
CHRNA9Q9UGM1 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CHRNA9Q9UGM1 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHRNA9Q9UGM1 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.25■□□□□ 0.35
CHRNA9Q9UGM1 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHRNA9Q9UGM1 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CHRNA9Q9UGM1 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
CHRNA9Q9UGM1 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHRNA9Q9UGM1 KRT8P11-201ENST00000409686 1436 ntBASIC17.25■□□□□ 0.35
CHRNA9Q9UGM1 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.25■□□□□ 0.35
CHRNA9Q9UGM1 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHRNA9Q9UGM1 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
CHRNA9Q9UGM1 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHRNA9Q9UGM1 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHRNA9Q9UGM1 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC17.25■□□□□ 0.35
CHRNA9Q9UGM1 AL355355.2-201ENST00000442321 338 ntBASIC17.25■□□□□ 0.35
CHRNA9Q9UGM1 FAM207BP-201ENST00000447172 505 ntBASIC17.25■□□□□ 0.35
CHRNA9Q9UGM1 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC17.25■□□□□ 0.35
CHRNA9Q9UGM1 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CHRNA9Q9UGM1 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHRNA9Q9UGM1 AC116562.2-201ENST00000507042 360 ntBASIC17.25■□□□□ 0.35
CHRNA9Q9UGM1 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CHRNA9Q9UGM1 AC026471.5-201ENST00000615068 467 ntBASIC17.25■□□□□ 0.35
CHRNA9Q9UGM1 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
CHRNA9Q9UGM1 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.25■□□□□ 0.35
CHRNA9Q9UGM1 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.25■□□□□ 0.35
CHRNA9Q9UGM1 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms