Protein–RNA interactions for Protein: Q9NZI7

UBP1, Upstream-binding protein 1, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1Q9NZI7 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC19.28■□□□□ 0.68
UBP1Q9NZI7 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC19.28■□□□□ 0.68
UBP1Q9NZI7 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
UBP1Q9NZI7 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
UBP1Q9NZI7 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
UBP1Q9NZI7 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
UBP1Q9NZI7 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
UBP1Q9NZI7 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
UBP1Q9NZI7 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
UBP1Q9NZI7 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
UBP1Q9NZI7 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC19.27■□□□□ 0.68
UBP1Q9NZI7 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.27■□□□□ 0.68
UBP1Q9NZI7 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
UBP1Q9NZI7 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
UBP1Q9NZI7 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
UBP1Q9NZI7 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
UBP1Q9NZI7 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
UBP1Q9NZI7 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
UBP1Q9NZI7 FAM207BP-201ENST00000447172 505 ntBASIC19.27■□□□□ 0.68
UBP1Q9NZI7 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.27■□□□□ 0.68
UBP1Q9NZI7 AP001412.1-201ENST00000608405 714 ntBASIC19.27■□□□□ 0.68
UBP1Q9NZI7 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.27■□□□□ 0.68
UBP1Q9NZI7 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
UBP1Q9NZI7 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.27■□□□□ 0.68
UBP1Q9NZI7 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
UBP1Q9NZI7 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
UBP1Q9NZI7 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC19.27■□□□□ 0.67
UBP1Q9NZI7 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
UBP1Q9NZI7 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
UBP1Q9NZI7 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.67
UBP1Q9NZI7 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
UBP1Q9NZI7 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
UBP1Q9NZI7 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC19.27■□□□□ 0.67
UBP1Q9NZI7 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
UBP1Q9NZI7 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19.26■□□□□ 0.67
UBP1Q9NZI7 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
UBP1Q9NZI7 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC19.26■□□□□ 0.67
UBP1Q9NZI7 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
UBP1Q9NZI7 TSPY7P-201ENST00000431358 1114 ntBASIC19.26■□□□□ 0.67
UBP1Q9NZI7 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC19.26■□□□□ 0.67
UBP1Q9NZI7 NUDT16P1-203ENST00000513809 620 ntBASIC19.26■□□□□ 0.67
UBP1Q9NZI7 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC19.26■□□□□ 0.67
UBP1Q9NZI7 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC19.26■□□□□ 0.67
UBP1Q9NZI7 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.26■□□□□ 0.67
UBP1Q9NZI7 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
UBP1Q9NZI7 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
UBP1Q9NZI7 FSCN1P1-201ENST00000568912 1481 ntBASIC19.26■□□□□ 0.67
UBP1Q9NZI7 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
UBP1Q9NZI7 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
UBP1Q9NZI7 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
UBP1Q9NZI7 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
UBP1Q9NZI7 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
UBP1Q9NZI7 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.26■□□□□ 0.67
UBP1Q9NZI7 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
UBP1Q9NZI7 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
UBP1Q9NZI7 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC19.25■□□□□ 0.67
UBP1Q9NZI7 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
UBP1Q9NZI7 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
UBP1Q9NZI7 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
UBP1Q9NZI7 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
UBP1Q9NZI7 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
UBP1Q9NZI7 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
UBP1Q9NZI7 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
UBP1Q9NZI7 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
UBP1Q9NZI7 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
UBP1Q9NZI7 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC19.25■□□□□ 0.67
UBP1Q9NZI7 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC19.25■□□□□ 0.67
UBP1Q9NZI7 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
UBP1Q9NZI7 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC19.25■□□□□ 0.67
UBP1Q9NZI7 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC19.25■□□□□ 0.67
UBP1Q9NZI7 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
UBP1Q9NZI7 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC19.25■□□□□ 0.67
UBP1Q9NZI7 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.25■□□□□ 0.67
UBP1Q9NZI7 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.25■□□□□ 0.67
UBP1Q9NZI7 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
UBP1Q9NZI7 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
UBP1Q9NZI7 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
UBP1Q9NZI7 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
UBP1Q9NZI7 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
UBP1Q9NZI7 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
UBP1Q9NZI7 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
UBP1Q9NZI7 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
UBP1Q9NZI7 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC19.25■□□□□ 0.67
UBP1Q9NZI7 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC19.24■□□□□ 0.67
UBP1Q9NZI7 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
UBP1Q9NZI7 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
UBP1Q9NZI7 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
UBP1Q9NZI7 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
UBP1Q9NZI7 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
UBP1Q9NZI7 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.24■□□□□ 0.67
UBP1Q9NZI7 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC19.24■□□□□ 0.67
UBP1Q9NZI7 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC19.24■□□□□ 0.67
UBP1Q9NZI7 AL355355.2-201ENST00000442321 338 ntBASIC19.24■□□□□ 0.67
UBP1Q9NZI7 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC19.24■□□□□ 0.67
UBP1Q9NZI7 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC19.24■□□□□ 0.67
UBP1Q9NZI7 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
UBP1Q9NZI7 AC026471.5-201ENST00000615068 467 ntBASIC19.24■□□□□ 0.67
UBP1Q9NZI7 REXO1L10P-201ENST00000615707 1290 ntBASIC19.24■□□□□ 0.67
UBP1Q9NZI7 REXO1L12P-201ENST00000622156 912 ntBASIC19.24■□□□□ 0.67
UBP1Q9NZI7 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms