Protein–RNA interactions for Protein: Q9NX63

CHCHD3, MICOS complex subunit MIC19, humanhuman

Known RBP Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3Q9NX63 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHCHD3Q9NX63 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CHCHD3Q9NX63 LINC02228-203ENST00000641970 1355 ntBASIC17.59■□□□□ 0.41
CHCHD3Q9NX63 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHCHD3Q9NX63 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHCHD3Q9NX63 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC17.59■□□□□ 0.41
CHCHD3Q9NX63 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC17.59■□□□□ 0.41
CHCHD3Q9NX63 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CHCHD3Q9NX63 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC17.59■□□□□ 0.41
CHCHD3Q9NX63 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC17.59■□□□□ 0.41
CHCHD3Q9NX63 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC17.59■□□□□ 0.41
CHCHD3Q9NX63 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CHCHD3Q9NX63 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHCHD3Q9NX63 FER1L4-210ENST00000615531 5998 ntBASIC17.59■□□□□ 0.41
CHCHD3Q9NX63 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
CHCHD3Q9NX63 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
CHCHD3Q9NX63 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
CHCHD3Q9NX63 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHCHD3Q9NX63 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CHCHD3Q9NX63 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.41
CHCHD3Q9NX63 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.58■□□□□ 0.41
CHCHD3Q9NX63 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CHCHD3Q9NX63 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CHCHD3Q9NX63 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CHCHD3Q9NX63 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC17.58■□□□□ 0.41
CHCHD3Q9NX63 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.58■□□□□ 0.41
CHCHD3Q9NX63 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.58■□□□□ 0.41
CHCHD3Q9NX63 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CHCHD3Q9NX63 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CHCHD3Q9NX63 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
CHCHD3Q9NX63 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
CHCHD3Q9NX63 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CHCHD3Q9NX63 HLA-G-202ENST00000376815 851 ntBASIC17.58■□□□□ 0.4
CHCHD3Q9NX63 HLA-G-203ENST00000376818 1127 ntBASIC17.58■□□□□ 0.4
CHCHD3Q9NX63 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC17.58■□□□□ 0.4
CHCHD3Q9NX63 CASP6-205ENST00000505486 538 ntTSL 4 BASIC17.58■□□□□ 0.4
CHCHD3Q9NX63 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.58■□□□□ 0.4
CHCHD3Q9NX63 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CHCHD3Q9NX63 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CHCHD3Q9NX63 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
CHCHD3Q9NX63 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
CHCHD3Q9NX63 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
CHCHD3Q9NX63 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
CHCHD3Q9NX63 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
CHCHD3Q9NX63 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CHCHD3Q9NX63 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
CHCHD3Q9NX63 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CHCHD3Q9NX63 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
CHCHD3Q9NX63 PTBP1P-201ENST00000554374 1601 ntBASIC17.58■□□□□ 0.4
CHCHD3Q9NX63 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
CHCHD3Q9NX63 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHCHD3Q9NX63 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC17.57■□□□□ 0.4
CHCHD3Q9NX63 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHCHD3Q9NX63 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CHCHD3Q9NX63 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.57■□□□□ 0.4
CHCHD3Q9NX63 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.57■□□□□ 0.4
CHCHD3Q9NX63 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.57■□□□□ 0.4
CHCHD3Q9NX63 CROCCP3-202ENST00000420820 1947 ntBASIC17.57■□□□□ 0.4
CHCHD3Q9NX63 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
CHCHD3Q9NX63 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHCHD3Q9NX63 AC019069.1-201ENST00000610008 1333 ntBASIC17.57■□□□□ 0.4
CHCHD3Q9NX63 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHCHD3Q9NX63 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHCHD3Q9NX63 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CHCHD3Q9NX63 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.57■□□□□ 0.4
CHCHD3Q9NX63 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CHCHD3Q9NX63 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC17.57■□□□□ 0.4
CHCHD3Q9NX63 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC17.57■□□□□ 0.4
CHCHD3Q9NX63 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CHCHD3Q9NX63 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC17.57■□□□□ 0.4
CHCHD3Q9NX63 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHCHD3Q9NX63 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHCHD3Q9NX63 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHCHD3Q9NX63 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHCHD3Q9NX63 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
CHCHD3Q9NX63 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.57■□□□□ 0.4
CHCHD3Q9NX63 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHCHD3Q9NX63 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CHCHD3Q9NX63 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHCHD3Q9NX63 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
CHCHD3Q9NX63 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CHCHD3Q9NX63 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.57■□□□□ 0.4
CHCHD3Q9NX63 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHCHD3Q9NX63 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHCHD3Q9NX63 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CHCHD3Q9NX63 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHCHD3Q9NX63 AC135776.1-201ENST00000319817 2481 ntBASIC17.56■□□□□ 0.4
CHCHD3Q9NX63 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC17.56■□□□□ 0.4
CHCHD3Q9NX63 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CHCHD3Q9NX63 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHCHD3Q9NX63 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC17.56■□□□□ 0.4
CHCHD3Q9NX63 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC17.56■□□□□ 0.4
CHCHD3Q9NX63 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC17.56■□□□□ 0.4
CHCHD3Q9NX63 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHCHD3Q9NX63 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC17.56■□□□□ 0.4
CHCHD3Q9NX63 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC17.56■□□□□ 0.4
CHCHD3Q9NX63 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC17.56■□□□□ 0.4
CHCHD3Q9NX63 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHCHD3Q9NX63 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CHCHD3Q9NX63 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms