Protein–RNA interactions for Protein: Q9NUQ8

ABCF3, ATP-binding cassette sub-family F member 3, humanhuman

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3Q9NUQ8 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
ABCF3Q9NUQ8 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ABCF3Q9NUQ8 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ABCF3Q9NUQ8 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.23■□□□□ 0.67
ABCF3Q9NUQ8 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC19.23■□□□□ 0.67
ABCF3Q9NUQ8 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ABCF3Q9NUQ8 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ABCF3Q9NUQ8 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC19.23■□□□□ 0.67
ABCF3Q9NUQ8 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.23■□□□□ 0.67
ABCF3Q9NUQ8 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ABCF3Q9NUQ8 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ABCF3Q9NUQ8 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ABCF3Q9NUQ8 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC19.23■□□□□ 0.67
ABCF3Q9NUQ8 CD99P1-205ENST00000527459 561 ntBASIC19.23■□□□□ 0.67
ABCF3Q9NUQ8 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC19.23■□□□□ 0.67
ABCF3Q9NUQ8 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ABCF3Q9NUQ8 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
ABCF3Q9NUQ8 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
ABCF3Q9NUQ8 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ABCF3Q9NUQ8 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
ABCF3Q9NUQ8 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ABCF3Q9NUQ8 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ABCF3Q9NUQ8 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ABCF3Q9NUQ8 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
ABCF3Q9NUQ8 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ABCF3Q9NUQ8 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
ABCF3Q9NUQ8 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.22■□□□□ 0.67
ABCF3Q9NUQ8 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ABCF3Q9NUQ8 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.22■□□□□ 0.67
ABCF3Q9NUQ8 PHGDH-210ENST00000641115 1638 ntBASIC19.22■□□□□ 0.67
ABCF3Q9NUQ8 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ABCF3Q9NUQ8 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC19.22■□□□□ 0.67
ABCF3Q9NUQ8 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
ABCF3Q9NUQ8 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.22■□□□□ 0.67
ABCF3Q9NUQ8 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC19.22■□□□□ 0.67
ABCF3Q9NUQ8 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ABCF3Q9NUQ8 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ABCF3Q9NUQ8 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ABCF3Q9NUQ8 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ABCF3Q9NUQ8 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ABCF3Q9NUQ8 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ABCF3Q9NUQ8 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ABCF3Q9NUQ8 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ABCF3Q9NUQ8 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
ABCF3Q9NUQ8 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC19.22■□□□□ 0.67
ABCF3Q9NUQ8 GAS7-202ENST00000396115 929 ntTSL 5 BASIC19.22■□□□□ 0.67
ABCF3Q9NUQ8 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ABCF3Q9NUQ8 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ABCF3Q9NUQ8 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.22■□□□□ 0.67
ABCF3Q9NUQ8 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.22■□□□□ 0.67
ABCF3Q9NUQ8 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
ABCF3Q9NUQ8 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ABCF3Q9NUQ8 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ABCF3Q9NUQ8 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ABCF3Q9NUQ8 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ABCF3Q9NUQ8 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ABCF3Q9NUQ8 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
ABCF3Q9NUQ8 AC106820.2-201ENST00000563775 3264 ntBASIC19.22■□□□□ 0.67
ABCF3Q9NUQ8 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
ABCF3Q9NUQ8 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ABCF3Q9NUQ8 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
ABCF3Q9NUQ8 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ABCF3Q9NUQ8 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ABCF3Q9NUQ8 TEX21P-204ENST00000641479 1693 ntBASIC19.21■□□□□ 0.67
ABCF3Q9NUQ8 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19.21■□□□□ 0.67
ABCF3Q9NUQ8 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.21■□□□□ 0.67
ABCF3Q9NUQ8 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
ABCF3Q9NUQ8 CD276-201ENST00000318424 2738 ntTSL 5 BASIC19.21■□□□□ 0.67
ABCF3Q9NUQ8 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
ABCF3Q9NUQ8 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ABCF3Q9NUQ8 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ABCF3Q9NUQ8 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
ABCF3Q9NUQ8 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
ABCF3Q9NUQ8 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ABCF3Q9NUQ8 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.67
ABCF3Q9NUQ8 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
ABCF3Q9NUQ8 UNC93B5-201ENST00000530315 699 ntBASIC19.21■□□□□ 0.67
ABCF3Q9NUQ8 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC19.21■□□□□ 0.67
ABCF3Q9NUQ8 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.21■□□□□ 0.67
ABCF3Q9NUQ8 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC19.21■□□□□ 0.67
ABCF3Q9NUQ8 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC19.21■□□□□ 0.67
ABCF3Q9NUQ8 AC008687.6-201ENST00000596318 630 ntBASIC19.21■□□□□ 0.67
ABCF3Q9NUQ8 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC19.21■□□□□ 0.67
ABCF3Q9NUQ8 AC093525.10-201ENST00000625130 1569 ntBASIC19.21■□□□□ 0.67
ABCF3Q9NUQ8 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC19.21■□□□□ 0.67
ABCF3Q9NUQ8 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC19.21■□□□□ 0.67
ABCF3Q9NUQ8 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
ABCF3Q9NUQ8 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ABCF3Q9NUQ8 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC19.21■□□□□ 0.67
ABCF3Q9NUQ8 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
ABCF3Q9NUQ8 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.21■□□□□ 0.67
ABCF3Q9NUQ8 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC19.21■□□□□ 0.66
ABCF3Q9NUQ8 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
ABCF3Q9NUQ8 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ABCF3Q9NUQ8 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ABCF3Q9NUQ8 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
ABCF3Q9NUQ8 AP001271.2-201ENST00000624018 1556 ntBASIC19.2■□□□□ 0.66
ABCF3Q9NUQ8 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ABCF3Q9NUQ8 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ABCF3Q9NUQ8 CD276-203ENST00000537340 2439 ntTSL 2 BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms