Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
BLOC1S4Q9NUP1 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC21.06■□□□□ 0.96
BLOC1S4Q9NUP1 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
BLOC1S4Q9NUP1 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
BLOC1S4Q9NUP1 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
BLOC1S4Q9NUP1 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
BLOC1S4Q9NUP1 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC21.05■□□□□ 0.96
BLOC1S4Q9NUP1 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
BLOC1S4Q9NUP1 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
BLOC1S4Q9NUP1 Z98044.1-201ENST00000632503 1764 ntBASIC21.05■□□□□ 0.96
BLOC1S4Q9NUP1 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
BLOC1S4Q9NUP1 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC21.05■□□□□ 0.96
BLOC1S4Q9NUP1 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
BLOC1S4Q9NUP1 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
BLOC1S4Q9NUP1 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC21.05■□□□□ 0.96
BLOC1S4Q9NUP1 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
BLOC1S4Q9NUP1 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
BLOC1S4Q9NUP1 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC21.05■□□□□ 0.96
BLOC1S4Q9NUP1 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
BLOC1S4Q9NUP1 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC21.05■□□□□ 0.96
BLOC1S4Q9NUP1 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
BLOC1S4Q9NUP1 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC21.05■□□□□ 0.96
BLOC1S4Q9NUP1 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC21.05■□□□□ 0.96
BLOC1S4Q9NUP1 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC21.05■□□□□ 0.96
BLOC1S4Q9NUP1 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
BLOC1S4Q9NUP1 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
BLOC1S4Q9NUP1 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC21.05■□□□□ 0.96
BLOC1S4Q9NUP1 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC21.05■□□□□ 0.96
BLOC1S4Q9NUP1 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC21.05■□□□□ 0.96
BLOC1S4Q9NUP1 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
BLOC1S4Q9NUP1 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
BLOC1S4Q9NUP1 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC21.04■□□□□ 0.96
BLOC1S4Q9NUP1 KRT8P9-201ENST00000558927 1449 ntBASIC21.04■□□□□ 0.96
BLOC1S4Q9NUP1 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
BLOC1S4Q9NUP1 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC21.04■□□□□ 0.96
BLOC1S4Q9NUP1 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC21.04■□□□□ 0.96
BLOC1S4Q9NUP1 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
BLOC1S4Q9NUP1 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
BLOC1S4Q9NUP1 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
BLOC1S4Q9NUP1 AL023803.3-201ENST00000615559 522 ntBASIC21.04■□□□□ 0.96
BLOC1S4Q9NUP1 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
BLOC1S4Q9NUP1 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC21.04■□□□□ 0.96
BLOC1S4Q9NUP1 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
BLOC1S4Q9NUP1 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
BLOC1S4Q9NUP1 COBL-210ENST00000632460 1941 ntTSL 5 BASIC21.04■□□□□ 0.96
BLOC1S4Q9NUP1 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC21.04■□□□□ 0.96
BLOC1S4Q9NUP1 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC21.04■□□□□ 0.96
BLOC1S4Q9NUP1 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC21.04■□□□□ 0.96
BLOC1S4Q9NUP1 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
BLOC1S4Q9NUP1 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
BLOC1S4Q9NUP1 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC21.04■□□□□ 0.96
BLOC1S4Q9NUP1 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
BLOC1S4Q9NUP1 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC21.04■□□□□ 0.96
BLOC1S4Q9NUP1 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
BLOC1S4Q9NUP1 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC21.03■□□□□ 0.96
BLOC1S4Q9NUP1 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
BLOC1S4Q9NUP1 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC21.03■□□□□ 0.96
BLOC1S4Q9NUP1 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
BLOC1S4Q9NUP1 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
BLOC1S4Q9NUP1 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
BLOC1S4Q9NUP1 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC21.03■□□□□ 0.96
BLOC1S4Q9NUP1 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
BLOC1S4Q9NUP1 MIR1238-201ENST00000408483 83 ntBASIC21.03■□□□□ 0.96
BLOC1S4Q9NUP1 CA15P1-201ENST00000481698 905 ntBASIC21.03■□□□□ 0.96
BLOC1S4Q9NUP1 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
BLOC1S4Q9NUP1 CYGB-204ENST00000589342 815 ntTSL 3 BASIC21.03■□□□□ 0.96
BLOC1S4Q9NUP1 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
BLOC1S4Q9NUP1 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
BLOC1S4Q9NUP1 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
BLOC1S4Q9NUP1 ANO7L1-203ENST00000602586 1720 ntBASIC21.03■□□□□ 0.96
BLOC1S4Q9NUP1 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
BLOC1S4Q9NUP1 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
BLOC1S4Q9NUP1 RCC2P3-201ENST00000418112 1537 ntBASIC21.03■□□□□ 0.96
BLOC1S4Q9NUP1 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
BLOC1S4Q9NUP1 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC21.03■□□□□ 0.96
BLOC1S4Q9NUP1 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
BLOC1S4Q9NUP1 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC21.02■□□□□ 0.96
BLOC1S4Q9NUP1 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
BLOC1S4Q9NUP1 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
BLOC1S4Q9NUP1 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
BLOC1S4Q9NUP1 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC21.02■□□□□ 0.96
BLOC1S4Q9NUP1 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
BLOC1S4Q9NUP1 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
BLOC1S4Q9NUP1 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
BLOC1S4Q9NUP1 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
BLOC1S4Q9NUP1 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
BLOC1S4Q9NUP1 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
BLOC1S4Q9NUP1 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
BLOC1S4Q9NUP1 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC21.02■□□□□ 0.96
BLOC1S4Q9NUP1 MIR4674-201ENST00000582457 87 ntBASIC21.02■□□□□ 0.96
BLOC1S4Q9NUP1 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC21.02■□□□□ 0.96
BLOC1S4Q9NUP1 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC21.02■□□□□ 0.96
BLOC1S4Q9NUP1 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC21.02■□□□□ 0.96
BLOC1S4Q9NUP1 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC21.02■□□□□ 0.96
BLOC1S4Q9NUP1 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC21.02■□□□□ 0.95
BLOC1S4Q9NUP1 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
BLOC1S4Q9NUP1 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC21.02■□□□□ 0.95
BLOC1S4Q9NUP1 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
BLOC1S4Q9NUP1 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
BLOC1S4Q9NUP1 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms