Protein–RNA interactions for Protein: Q9NRF8

CTPS2, CTP synthase 2, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS2Q9NRF8 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CTPS2Q9NRF8 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.63■□□□□ 0.41
CTPS2Q9NRF8 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CTPS2Q9NRF8 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
CTPS2Q9NRF8 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
CTPS2Q9NRF8 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CTPS2Q9NRF8 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CTPS2Q9NRF8 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CTPS2Q9NRF8 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CTPS2Q9NRF8 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CTPS2Q9NRF8 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CTPS2Q9NRF8 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CTPS2Q9NRF8 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CTPS2Q9NRF8 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CTPS2Q9NRF8 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CTPS2Q9NRF8 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.62■□□□□ 0.41
CTPS2Q9NRF8 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
CTPS2Q9NRF8 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC17.62■□□□□ 0.41
CTPS2Q9NRF8 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CTPS2Q9NRF8 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CTPS2Q9NRF8 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC17.62■□□□□ 0.41
CTPS2Q9NRF8 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.62■□□□□ 0.41
CTPS2Q9NRF8 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC17.62■□□□□ 0.41
CTPS2Q9NRF8 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CTPS2Q9NRF8 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CTPS2Q9NRF8 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CTPS2Q9NRF8 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CTPS2Q9NRF8 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CTPS2Q9NRF8 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CTPS2Q9NRF8 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CTPS2Q9NRF8 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CTPS2Q9NRF8 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CTPS2Q9NRF8 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.62■□□□□ 0.41
CTPS2Q9NRF8 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CTPS2Q9NRF8 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CTPS2Q9NRF8 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC17.62■□□□□ 0.41
CTPS2Q9NRF8 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CTPS2Q9NRF8 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CTPS2Q9NRF8 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CTPS2Q9NRF8 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CTPS2Q9NRF8 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.61■□□□□ 0.41
CTPS2Q9NRF8 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CTPS2Q9NRF8 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
CTPS2Q9NRF8 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CTPS2Q9NRF8 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CTPS2Q9NRF8 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CTPS2Q9NRF8 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CTPS2Q9NRF8 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC17.61■□□□□ 0.41
CTPS2Q9NRF8 AC133681.1-201ENST00000465482 601 ntBASIC17.61■□□□□ 0.41
CTPS2Q9NRF8 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
CTPS2Q9NRF8 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
CTPS2Q9NRF8 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CTPS2Q9NRF8 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC17.61■□□□□ 0.41
CTPS2Q9NRF8 AC110285.5-201ENST00000611501 352 ntBASIC17.61■□□□□ 0.41
CTPS2Q9NRF8 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC17.61■□□□□ 0.41
CTPS2Q9NRF8 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CTPS2Q9NRF8 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CTPS2Q9NRF8 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.61■□□□□ 0.41
CTPS2Q9NRF8 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CTPS2Q9NRF8 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CTPS2Q9NRF8 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CTPS2Q9NRF8 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CTPS2Q9NRF8 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CTPS2Q9NRF8 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.61■□□□□ 0.41
CTPS2Q9NRF8 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CTPS2Q9NRF8 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CTPS2Q9NRF8 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.6■□□□□ 0.41
CTPS2Q9NRF8 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CTPS2Q9NRF8 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
CTPS2Q9NRF8 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CTPS2Q9NRF8 AC009113.1-201ENST00000570267 2443 ntBASIC17.6■□□□□ 0.41
CTPS2Q9NRF8 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.6■□□□□ 0.41
CTPS2Q9NRF8 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
CTPS2Q9NRF8 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CTPS2Q9NRF8 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CTPS2Q9NRF8 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CTPS2Q9NRF8 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
CTPS2Q9NRF8 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
CTPS2Q9NRF8 RPPH1-201ENST00000516869 333 ntBASIC17.6■□□□□ 0.41
CTPS2Q9NRF8 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CTPS2Q9NRF8 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC17.6■□□□□ 0.41
CTPS2Q9NRF8 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CTPS2Q9NRF8 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
CTPS2Q9NRF8 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
CTPS2Q9NRF8 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.6■□□□□ 0.41
CTPS2Q9NRF8 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CTPS2Q9NRF8 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.6■□□□□ 0.41
CTPS2Q9NRF8 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CTPS2Q9NRF8 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CTPS2Q9NRF8 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.6■□□□□ 0.41
CTPS2Q9NRF8 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CTPS2Q9NRF8 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CTPS2Q9NRF8 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CTPS2Q9NRF8 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CTPS2Q9NRF8 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.59■□□□□ 0.41
CTPS2Q9NRF8 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CTPS2Q9NRF8 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CTPS2Q9NRF8 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.59■□□□□ 0.41
CTPS2Q9NRF8 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CTPS2Q9NRF8 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms