Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 AC087388.1-201ENST00000571370 1112 ntBASIC16.88■□□□□ 0.29
KIAA1549Q9HCM3 CR769767.2-201ENST00000622735 460 ntBASIC16.88■□□□□ 0.29
KIAA1549Q9HCM3 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC16.88■□□□□ 0.29
KIAA1549Q9HCM3 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
KIAA1549Q9HCM3 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
KIAA1549Q9HCM3 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
KIAA1549Q9HCM3 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
KIAA1549Q9HCM3 AL512353.2-201ENST00000448759 1962 ntBASIC16.88■□□□□ 0.29
KIAA1549Q9HCM3 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
KIAA1549Q9HCM3 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
KIAA1549Q9HCM3 RNF152P1-201ENST00000397754 604 ntBASIC16.88■□□□□ 0.29
KIAA1549Q9HCM3 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC16.88■□□□□ 0.29
KIAA1549Q9HCM3 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC16.88■□□□□ 0.29
KIAA1549Q9HCM3 AL590326.2-201ENST00000625139 305 ntBASIC16.88■□□□□ 0.29
KIAA1549Q9HCM3 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
KIAA1549Q9HCM3 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
KIAA1549Q9HCM3 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
KIAA1549Q9HCM3 ANO7L1-203ENST00000602586 1720 ntBASIC16.87■□□□□ 0.29
KIAA1549Q9HCM3 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
KIAA1549Q9HCM3 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
KIAA1549Q9HCM3 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
KIAA1549Q9HCM3 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
KIAA1549Q9HCM3 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
KIAA1549Q9HCM3 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC16.87■□□□□ 0.29
KIAA1549Q9HCM3 TSPY5P-201ENST00000426936 936 ntBASIC16.87■□□□□ 0.29
KIAA1549Q9HCM3 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC16.87■□□□□ 0.29
KIAA1549Q9HCM3 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC16.87■□□□□ 0.29
KIAA1549Q9HCM3 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
KIAA1549Q9HCM3 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC16.87■□□□□ 0.29
KIAA1549Q9HCM3 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC16.87■□□□□ 0.29
KIAA1549Q9HCM3 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC16.87■□□□□ 0.29
KIAA1549Q9HCM3 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC16.87■□□□□ 0.29
KIAA1549Q9HCM3 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
KIAA1549Q9HCM3 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
KIAA1549Q9HCM3 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
KIAA1549Q9HCM3 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
KIAA1549Q9HCM3 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC16.87■□□□□ 0.29
KIAA1549Q9HCM3 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
KIAA1549Q9HCM3 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
KIAA1549Q9HCM3 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
KIAA1549Q9HCM3 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
KIAA1549Q9HCM3 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
KIAA1549Q9HCM3 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
KIAA1549Q9HCM3 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
KIAA1549Q9HCM3 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
KIAA1549Q9HCM3 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
KIAA1549Q9HCM3 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
KIAA1549Q9HCM3 SPDYE15P-201ENST00000424157 909 ntBASIC16.86■□□□□ 0.29
KIAA1549Q9HCM3 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC16.86■□□□□ 0.29
KIAA1549Q9HCM3 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC16.86■□□□□ 0.29
KIAA1549Q9HCM3 CD81-212ENST00000526072 1172 ntTSL 5 BASIC16.86■□□□□ 0.29
KIAA1549Q9HCM3 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC16.86■□□□□ 0.29
KIAA1549Q9HCM3 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC16.86■□□□□ 0.29
KIAA1549Q9HCM3 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC16.86■□□□□ 0.29
KIAA1549Q9HCM3 AL358472.4-201ENST00000633140 710 ntBASIC16.86■□□□□ 0.29
KIAA1549Q9HCM3 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
KIAA1549Q9HCM3 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC16.86■□□□□ 0.29
KIAA1549Q9HCM3 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
KIAA1549Q9HCM3 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
KIAA1549Q9HCM3 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
KIAA1549Q9HCM3 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC16.86■□□□□ 0.29
KIAA1549Q9HCM3 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
KIAA1549Q9HCM3 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
KIAA1549Q9HCM3 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
KIAA1549Q9HCM3 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC16.86■□□□□ 0.29
KIAA1549Q9HCM3 AC005332.1-201ENST00000577698 1310 ntBASIC16.86■□□□□ 0.29
KIAA1549Q9HCM3 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
KIAA1549Q9HCM3 FEM1AP3-201ENST00000403722 1741 ntBASIC16.86■□□□□ 0.29
KIAA1549Q9HCM3 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
KIAA1549Q9HCM3 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
KIAA1549Q9HCM3 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
KIAA1549Q9HCM3 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC16.86■□□□□ 0.29
KIAA1549Q9HCM3 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC16.86■□□□□ 0.29
KIAA1549Q9HCM3 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
KIAA1549Q9HCM3 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
KIAA1549Q9HCM3 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC16.86■□□□□ 0.29
KIAA1549Q9HCM3 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC16.86■□□□□ 0.29
KIAA1549Q9HCM3 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC16.86■□□□□ 0.29
KIAA1549Q9HCM3 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
KIAA1549Q9HCM3 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC16.86■□□□□ 0.29
KIAA1549Q9HCM3 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC16.85■□□□□ 0.29
KIAA1549Q9HCM3 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
KIAA1549Q9HCM3 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
KIAA1549Q9HCM3 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC16.85■□□□□ 0.29
KIAA1549Q9HCM3 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
KIAA1549Q9HCM3 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
KIAA1549Q9HCM3 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
KIAA1549Q9HCM3 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
KIAA1549Q9HCM3 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
KIAA1549Q9HCM3 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC16.85■□□□□ 0.29
KIAA1549Q9HCM3 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
KIAA1549Q9HCM3 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
KIAA1549Q9HCM3 SAPCD2P2-201ENST00000431719 1174 ntBASIC16.85■□□□□ 0.29
KIAA1549Q9HCM3 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC16.85■□□□□ 0.29
KIAA1549Q9HCM3 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC16.85■□□□□ 0.29
KIAA1549Q9HCM3 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
KIAA1549Q9HCM3 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
KIAA1549Q9HCM3 MED25-212ENST00000618715 1467 ntTSL 5 BASIC16.85■□□□□ 0.29
KIAA1549Q9HCM3 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
KIAA1549Q9HCM3 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms