Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC18.04■□□□□ 0.48
VCX3BQ9H321 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC18.04■□□□□ 0.48
VCX3BQ9H321 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC18.04■□□□□ 0.48
VCX3BQ9H321 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.04■□□□□ 0.48
VCX3BQ9H321 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
VCX3BQ9H321 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
VCX3BQ9H321 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
VCX3BQ9H321 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
VCX3BQ9H321 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.04■□□□□ 0.48
VCX3BQ9H321 AC012317.2-201ENST00000623305 2251 ntBASIC18.03■□□□□ 0.48
VCX3BQ9H321 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.03■□□□□ 0.48
VCX3BQ9H321 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC18.03■□□□□ 0.48
VCX3BQ9H321 AL391005.1-201ENST00000623953 2435 ntBASIC18.03■□□□□ 0.48
VCX3BQ9H321 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
VCX3BQ9H321 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
VCX3BQ9H321 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
VCX3BQ9H321 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
VCX3BQ9H321 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
VCX3BQ9H321 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC18.03■□□□□ 0.48
VCX3BQ9H321 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.03■□□□□ 0.48
VCX3BQ9H321 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
VCX3BQ9H321 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
VCX3BQ9H321 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
VCX3BQ9H321 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC18.03■□□□□ 0.48
VCX3BQ9H321 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
VCX3BQ9H321 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
VCX3BQ9H321 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
VCX3BQ9H321 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
VCX3BQ9H321 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.03■□□□□ 0.48
VCX3BQ9H321 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
VCX3BQ9H321 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
VCX3BQ9H321 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
VCX3BQ9H321 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
VCX3BQ9H321 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
VCX3BQ9H321 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
VCX3BQ9H321 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
VCX3BQ9H321 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
VCX3BQ9H321 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
VCX3BQ9H321 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.02■□□□□ 0.48
VCX3BQ9H321 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
VCX3BQ9H321 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
VCX3BQ9H321 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
VCX3BQ9H321 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
VCX3BQ9H321 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC18.02■□□□□ 0.48
VCX3BQ9H321 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.02■□□□□ 0.48
VCX3BQ9H321 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
VCX3BQ9H321 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
VCX3BQ9H321 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
VCX3BQ9H321 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
VCX3BQ9H321 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
VCX3BQ9H321 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
VCX3BQ9H321 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
VCX3BQ9H321 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
VCX3BQ9H321 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
VCX3BQ9H321 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
VCX3BQ9H321 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
VCX3BQ9H321 AC010141.2-201ENST00000452426 721 ntBASIC18.02■□□□□ 0.48
VCX3BQ9H321 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
VCX3BQ9H321 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC18.02■□□□□ 0.48
VCX3BQ9H321 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC18.02■□□□□ 0.48
VCX3BQ9H321 AL512631.2-201ENST00000604634 923 ntBASIC18.02■□□□□ 0.48
VCX3BQ9H321 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
VCX3BQ9H321 AC083906.6-201ENST00000641366 219 ntBASIC18.02■□□□□ 0.48
VCX3BQ9H321 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
VCX3BQ9H321 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
VCX3BQ9H321 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
VCX3BQ9H321 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.47
VCX3BQ9H321 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
VCX3BQ9H321 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
VCX3BQ9H321 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
VCX3BQ9H321 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
VCX3BQ9H321 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
VCX3BQ9H321 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
VCX3BQ9H321 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
VCX3BQ9H321 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
VCX3BQ9H321 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
VCX3BQ9H321 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.01■□□□□ 0.47
VCX3BQ9H321 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC18.01■□□□□ 0.47
VCX3BQ9H321 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.01■□□□□ 0.47
VCX3BQ9H321 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.01■□□□□ 0.47
VCX3BQ9H321 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
VCX3BQ9H321 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.01■□□□□ 0.47
VCX3BQ9H321 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC18.01■□□□□ 0.47
VCX3BQ9H321 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
VCX3BQ9H321 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
VCX3BQ9H321 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC18.01■□□□□ 0.47
VCX3BQ9H321 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
VCX3BQ9H321 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC18.01■□□□□ 0.47
VCX3BQ9H321 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.01■□□□□ 0.47
VCX3BQ9H321 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
VCX3BQ9H321 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.01■□□□□ 0.47
VCX3BQ9H321 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.01■□□□□ 0.47
VCX3BQ9H321 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
VCX3BQ9H321 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
VCX3BQ9H321 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
VCX3BQ9H321 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
VCX3BQ9H321 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
VCX3BQ9H321 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
VCX3BQ9H321 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
VCX3BQ9H321 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms