Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRFN3Q9BTN0 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRFN3Q9BTN0 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRFN3Q9BTN0 BEX3-201ENST00000361298 921 ntTSL 2 BASIC18.88■□□□□ 0.61
LRFN3Q9BTN0 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LRFN3Q9BTN0 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC18.88■□□□□ 0.61
LRFN3Q9BTN0 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.88■□□□□ 0.61
LRFN3Q9BTN0 PAM16-208ENST00000573553 722 ntTSL 2 BASIC18.88■□□□□ 0.61
LRFN3Q9BTN0 MIR4469-201ENST00000583919 79 ntBASIC18.88■□□□□ 0.61
LRFN3Q9BTN0 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
LRFN3Q9BTN0 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
LRFN3Q9BTN0 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC18.88■□□□□ 0.61
LRFN3Q9BTN0 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRFN3Q9BTN0 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRFN3Q9BTN0 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LRFN3Q9BTN0 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
LRFN3Q9BTN0 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRFN3Q9BTN0 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRFN3Q9BTN0 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRFN3Q9BTN0 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
LRFN3Q9BTN0 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LRFN3Q9BTN0 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRFN3Q9BTN0 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
LRFN3Q9BTN0 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LRFN3Q9BTN0 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LRFN3Q9BTN0 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LRFN3Q9BTN0 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
LRFN3Q9BTN0 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LRFN3Q9BTN0 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LRFN3Q9BTN0 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LRFN3Q9BTN0 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
LRFN3Q9BTN0 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
LRFN3Q9BTN0 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC18.87■□□□□ 0.61
LRFN3Q9BTN0 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
LRFN3Q9BTN0 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
LRFN3Q9BTN0 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC18.87■□□□□ 0.61
LRFN3Q9BTN0 UNC93B6-202ENST00000528242 690 ntBASIC18.87■□□□□ 0.61
LRFN3Q9BTN0 AC009533.2-201ENST00000543664 586 ntBASIC18.87■□□□□ 0.61
LRFN3Q9BTN0 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
LRFN3Q9BTN0 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC18.87■□□□□ 0.61
LRFN3Q9BTN0 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
LRFN3Q9BTN0 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
LRFN3Q9BTN0 TREX1-205ENST00000625293 1783 ntBASIC18.86■□□□□ 0.61
LRFN3Q9BTN0 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
LRFN3Q9BTN0 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.86■□□□□ 0.61
LRFN3Q9BTN0 KRT8P3-201ENST00000519669 1449 ntBASIC18.86■□□□□ 0.61
LRFN3Q9BTN0 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LRFN3Q9BTN0 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LRFN3Q9BTN0 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LRFN3Q9BTN0 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LRFN3Q9BTN0 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
LRFN3Q9BTN0 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC18.86■□□□□ 0.61
LRFN3Q9BTN0 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC18.86■□□□□ 0.61
LRFN3Q9BTN0 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC18.86■□□□□ 0.61
LRFN3Q9BTN0 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC18.86■□□□□ 0.61
LRFN3Q9BTN0 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LRFN3Q9BTN0 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
LRFN3Q9BTN0 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LRFN3Q9BTN0 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LRFN3Q9BTN0 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.86■□□□□ 0.61
LRFN3Q9BTN0 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LRFN3Q9BTN0 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LRFN3Q9BTN0 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LRFN3Q9BTN0 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
LRFN3Q9BTN0 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LRFN3Q9BTN0 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LRFN3Q9BTN0 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC18.85■□□□□ 0.61
LRFN3Q9BTN0 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
LRFN3Q9BTN0 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LRFN3Q9BTN0 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
LRFN3Q9BTN0 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LRFN3Q9BTN0 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
LRFN3Q9BTN0 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LRFN3Q9BTN0 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LRFN3Q9BTN0 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LRFN3Q9BTN0 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LRFN3Q9BTN0 COPE-202ENST00000349893 948 ntTSL 2 BASIC18.85■□□□□ 0.61
LRFN3Q9BTN0 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LRFN3Q9BTN0 MCCD1P1-208ENST00000445732 328 ntBASIC18.85■□□□□ 0.61
LRFN3Q9BTN0 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC18.85■□□□□ 0.61
LRFN3Q9BTN0 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC18.85■□□□□ 0.61
LRFN3Q9BTN0 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC18.85■□□□□ 0.61
LRFN3Q9BTN0 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC18.85■□□□□ 0.61
LRFN3Q9BTN0 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC18.85■□□□□ 0.61
LRFN3Q9BTN0 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC18.85■□□□□ 0.61
LRFN3Q9BTN0 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
LRFN3Q9BTN0 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC18.85■□□□□ 0.61
LRFN3Q9BTN0 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LRFN3Q9BTN0 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LRFN3Q9BTN0 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC18.85■□□□□ 0.61
LRFN3Q9BTN0 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LRFN3Q9BTN0 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LRFN3Q9BTN0 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LRFN3Q9BTN0 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LRFN3Q9BTN0 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LRFN3Q9BTN0 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC18.84■□□□□ 0.61
LRFN3Q9BTN0 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.84■□□□□ 0.61
LRFN3Q9BTN0 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC18.84■□□□□ 0.61
LRFN3Q9BTN0 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.84■□□□□ 0.61
LRFN3Q9BTN0 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms