Protein–RNA interactions for Protein: Q9BQI6

SLF1, SMC5-SMC6 complex localization factor protein 1, humanhuman

Predictions only

Length 1,058 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1Q9BQI6 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC21.99■■□□□ 1.11
SLF1Q9BQI6 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC21.99■■□□□ 1.11
SLF1Q9BQI6 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
SLF1Q9BQI6 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC21.99■■□□□ 1.11
SLF1Q9BQI6 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
SLF1Q9BQI6 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
SLF1Q9BQI6 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SLF1Q9BQI6 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SLF1Q9BQI6 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
SLF1Q9BQI6 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SLF1Q9BQI6 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
SLF1Q9BQI6 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
SLF1Q9BQI6 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
SLF1Q9BQI6 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
SLF1Q9BQI6 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
SLF1Q9BQI6 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC21.98■■□□□ 1.11
SLF1Q9BQI6 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
SLF1Q9BQI6 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SLF1Q9BQI6 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SLF1Q9BQI6 KRT18P38-201ENST00000449496 1282 ntBASIC21.98■■□□□ 1.11
SLF1Q9BQI6 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC21.98■■□□□ 1.11
SLF1Q9BQI6 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC21.98■■□□□ 1.11
SLF1Q9BQI6 CR769767.2-201ENST00000622735 460 ntBASIC21.98■■□□□ 1.11
SLF1Q9BQI6 AL121956.5-201ENST00000625261 221 ntBASIC21.98■■□□□ 1.11
SLF1Q9BQI6 GOLGA6L5P-202ENST00000515341 1828 ntBASIC21.98■■□□□ 1.11
SLF1Q9BQI6 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC21.98■■□□□ 1.11
SLF1Q9BQI6 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC21.98■■□□□ 1.11
SLF1Q9BQI6 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
SLF1Q9BQI6 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC21.98■■□□□ 1.11
SLF1Q9BQI6 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC21.98■■□□□ 1.11
SLF1Q9BQI6 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC21.97■■□□□ 1.11
SLF1Q9BQI6 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SLF1Q9BQI6 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SLF1Q9BQI6 GAS2L1P1-201ENST00000420145 1480 ntBASIC21.97■■□□□ 1.11
SLF1Q9BQI6 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SLF1Q9BQI6 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
SLF1Q9BQI6 AC125437.2-201ENST00000625180 2167 ntBASIC21.97■■□□□ 1.11
SLF1Q9BQI6 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC21.97■■□□□ 1.11
SLF1Q9BQI6 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC21.97■■□□□ 1.11
SLF1Q9BQI6 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC21.97■■□□□ 1.11
SLF1Q9BQI6 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
SLF1Q9BQI6 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
SLF1Q9BQI6 UPK3BP1-201ENST00000428678 509 ntBASIC21.97■■□□□ 1.11
SLF1Q9BQI6 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC21.97■■□□□ 1.11
SLF1Q9BQI6 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC21.97■■□□□ 1.11
SLF1Q9BQI6 AL671277.2-201ENST00000458060 996 ntBASIC21.97■■□□□ 1.11
SLF1Q9BQI6 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC21.97■■□□□ 1.11
SLF1Q9BQI6 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
SLF1Q9BQI6 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC21.97■■□□□ 1.11
SLF1Q9BQI6 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
SLF1Q9BQI6 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
SLF1Q9BQI6 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC21.97■■□□□ 1.11
SLF1Q9BQI6 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC21.97■■□□□ 1.11
SLF1Q9BQI6 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SLF1Q9BQI6 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC21.97■■□□□ 1.11
SLF1Q9BQI6 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
SLF1Q9BQI6 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC21.97■■□□□ 1.11
SLF1Q9BQI6 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC21.97■■□□□ 1.11
SLF1Q9BQI6 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC21.97■■□□□ 1.11
SLF1Q9BQI6 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC21.97■■□□□ 1.11
SLF1Q9BQI6 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
SLF1Q9BQI6 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SLF1Q9BQI6 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SLF1Q9BQI6 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC21.96■■□□□ 1.11
SLF1Q9BQI6 PWWP2AP1-201ENST00000429776 2273 ntBASIC21.96■■□□□ 1.11
SLF1Q9BQI6 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC21.96■■□□□ 1.11
SLF1Q9BQI6 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC21.96■■□□□ 1.11
SLF1Q9BQI6 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
SLF1Q9BQI6 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC21.96■■□□□ 1.11
SLF1Q9BQI6 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
SLF1Q9BQI6 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC21.96■■□□□ 1.11
SLF1Q9BQI6 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SLF1Q9BQI6 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SLF1Q9BQI6 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
SLF1Q9BQI6 SNX5-210ENST00000481323 562 ntTSL 3 BASIC21.96■■□□□ 1.11
SLF1Q9BQI6 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC21.96■■□□□ 1.11
SLF1Q9BQI6 CD320-202ENST00000537716 1119 ntTSL 2 BASIC21.96■■□□□ 1.11
SLF1Q9BQI6 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC21.96■■□□□ 1.11
SLF1Q9BQI6 GCSHP2-201ENST00000560971 527 ntBASIC21.96■■□□□ 1.11
SLF1Q9BQI6 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC21.96■■□□□ 1.11
SLF1Q9BQI6 DBP-204ENST00000599385 709 ntTSL 3 BASIC21.96■■□□□ 1.11
SLF1Q9BQI6 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
SLF1Q9BQI6 AC116562.4-201ENST00000641316 2276 ntBASIC21.96■■□□□ 1.11
SLF1Q9BQI6 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC21.96■■□□□ 1.11
SLF1Q9BQI6 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SLF1Q9BQI6 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC21.96■■□□□ 1.11
SLF1Q9BQI6 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
SLF1Q9BQI6 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SLF1Q9BQI6 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC21.95■■□□□ 1.11
SLF1Q9BQI6 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
SLF1Q9BQI6 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC21.95■■□□□ 1.1
SLF1Q9BQI6 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC21.95■■□□□ 1.1
SLF1Q9BQI6 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SLF1Q9BQI6 TREX1-205ENST00000625293 1783 ntBASIC21.95■■□□□ 1.1
SLF1Q9BQI6 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SLF1Q9BQI6 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC21.95■■□□□ 1.1
SLF1Q9BQI6 ILF2-202ENST00000368681 726 ntTSL 2 BASIC21.95■■□□□ 1.1
SLF1Q9BQI6 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC21.95■■□□□ 1.1
SLF1Q9BQI6 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC21.95■■□□□ 1.1
SLF1Q9BQI6 FAM86EP-206ENST00000510506 987 ntBASIC21.95■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms